Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4165 |
Symbol | rbsR |
ID | 6272015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3889699 |
End bp | 3890691 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641727991 |
Product | transcriptional repressor RbsR |
Protein accession | YP_001882412 |
Protein GI | 187730470 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0172446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCTACAA TGAAAGATGT TTCCCGCCTG GCGGGCGTTT CTACCTCAAC AGTTTCTCAC GTTATCAATA AAGATCGCTT CGTCAGTGAA GCGATTACCG CCAAAGTTGA AGCGGCGATT AAAGAACTCA ATTACGCGCC ATCAGCCCTG GCGCGTAGCC TCAAACTCAA TCAAACACAT ACCATTGGCA TGTTGATCAC TGCCAGTACC AATCCTTTCT ATTCAGAACT GGTGCGTGGC GTTGAACGCA GCTGCTTCGA ACGCGGTTAT AGTCTCGTCC TTTGCAATAC CGAAGGCGAT GAACAGCGGA TGAATCGCAA TCTGGAAACG CTGATGCAAA AACGCGTTGA TGGCTTGCTG TTACTGTGCA CCGAAACGCA TCAACCTTCG CGTGAAATCA TGCAACGTTA TCCGACAGTG CCTACTGTGA TGATGGACTG GGCTCCGTTC GATGGCGACA GCGATCTTAT TCAGGATAAC TCGTTGCTGG GCGGAGACTT AGCAACGCAA TATCTGATCG ATAAAGGTCA TACCCGTATC GCCTGTATTA CCGGTCCGCT GGATAAAACT CCGGCGCGCC TGCGGTTGGA AGGTTATCGG GCGGCGATGA AACGTGCGGG TCTCAACATT CCTGATGGCT ATGAAGTCAC TGGTGATTTT GAATTTAACG GCGGGTTTGA CGCCATGCGC CAACTGTTAT CACATCCGCT GCGTCCTCAG GCCGTCTTTA CCGGAAATGA CGCTATGGCT GTTGGCGTTT ACCAGGCGTT ATATCAGGCA GAGTTACAGG TTCCGCAGGA TATCGCGGTG ATTGGCTATG ACGATATCGA ACTGGCAAGC TTTATGACGC CACCATTAAC CACTATCCAC CAACCGAAAG ATGAACTGGG GGAGCTGGCG ATTGATGTAC TCATCCATCG GATAACCCAG CCGACCCTTC AGCAACAACG ATTACAACTT ACTCCGATTC TGATGGAACG CGGTTCGGCT TAG
|
Protein sequence | MATMKDVSRL AGVSTSTVSH VINKDRFVSE AITAKVEAAI KELNYAPSAL ARSLKLNQTH TIGMLITAST NPFYSELVRG VERSCFERGY SLVLCNTEGD EQRMNRNLET LMQKRVDGLL LLCTETHQPS REIMQRYPTV PTVMMDWAPF DGDSDLIQDN SLLGGDLATQ YLIDKGHTRI ACITGPLDKT PARLRLEGYR AAMKRAGLNI PDGYEVTGDF EFNGGFDAMR QLLSHPLRPQ AVFTGNDAMA VGVYQALYQA ELQVPQDIAV IGYDDIELAS FMTPPLTTIH QPKDELGELA IDVLIHRITQ PTLQQQRLQL TPILMERGSA
|
| |