| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4125 |
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| Symbol | |
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| ID | 6270180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3845403 |
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| End bp | 3846788 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641727953 |
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| Product | putative transport protein YifK |
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| Protein accession | YP_001882380 |
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| Protein GI | 187733374 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000124535 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATA ACAAACCAGA GCTACAGCGT GGGCTGGAAG CTCGACATAT CGAACTCATC
GCCCTGGGGG GCACCATTGG CGTCGGCCTG TTTATGGGGG CCGCCAGTAC CTTGAAATGG
GCCGGGCCAT CCGTATTGTT GGCCTATATC ATCGCCGGGC TATTCGTCTT TTTCATCATG
CGTTCAATGG GCGAAATGTT GTTCCTCGAA CCGGTTACCG GTTCGTTCGC CGTTTATGCG
CATCGTTATA TGAGCCCGTT CTTTGGTTAT CTCACCGCCT GGTCTTATTG GTTTATGTGG
ATGGCGGTGG GGATCTCAGA AATCACCGCC ATTGGCGTTT ATGTCCAGTT CTGGTTCCCG
GAGATGGCGC AGTGGATACC CGCATTGATC GCAGTGGCGC TGGTGGCGTT GGCGAATCTG
GCGGCGGTGC GGTTGTACGG CGAAATCGAG TTCTGGTTCG CGATGATCAA AGTCACCACG
ATTATCGTGA TGATTGTCAT TGGCCTGGGC GTGATTTTCT TTGGCTTTGG CAATGGCGGG
CAGTCGATTG GTTTTAGCAA TCTCACAGAG CATGGCGGTT TCTTTGCGGG TGGCTGGAAA
GGGTTCCTGA CCGCGCTGTG TATTGTGGTG GCGTCCTACC AGGGCGTGGA GCTGATTGGC
ATTACTGCCG GTGAAGCGAA GAATCCGCAG GTGACGTTGC GCAGTGCCGT AGGCAAAGTG
CTGTGGCGGA TCCTGATTTT CTACGTAGGC GCGATTTTCG TTATCGTCAC CATCTTCCCG
TGGAATGAAA GTGGCAGCAA CGGCAGCCCG TTCGTACTGA CTTTTGCCAA AATCGGTATT
ACCGCAGCGG CGGGCATTAT CAACTTTGTG GTGCTGACGG CTGCGCTCTC TGGCTGTAAC
AGCGGCATGT ACAGTTGCGG ACGTATGCTC TACGCACTGG CGAAAAACCG TCAGTTACCG
GCGGCGATGG CGAAAGTTTC CCGTCACGGC GTACCAGTTG CGGGTGTGGC AGTATCTATT
GCTATTCTGC TAATTGGCTC ATGCCTGAAC TACATCATTC CCAATCCGCA GCGTGTGTTT
GTCTACGTCT ACAGTGCCAG CGTGCTTCCG GGGATGGTGC CATGGTTTGT GATATTGATA
AGCCAGCTGC GTTTTCGGCG TGCACATAAA GCGGCGATTG CCAGCCATCC GTTCCGCTCA
ATCCTGTTCC CGTGGGCCAA CTACGTAACA ATGGCATTCC TGATTTGCGT TTTGATCGGC
ATGTACTTTA ATGAAGATAC GCGTATGTCG CTGTTTGTTG GCATCATCTT TATGCTGGCG
GTGACGGCGA TTTATAAAGT TTTTGGCCTT AATCGCCACG GGAAAGCGCA TAAACTGGAG
GAATAA
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| Protein sequence | MADNKPELQR GLEARHIELI ALGGTIGVGL FMGAASTLKW AGPSVLLAYI IAGLFVFFIM
RSMGEMLFLE PVTGSFAVYA HRYMSPFFGY LTAWSYWFMW MAVGISEITA IGVYVQFWFP
EMAQWIPALI AVALVALANL AAVRLYGEIE FWFAMIKVTT IIVMIVIGLG VIFFGFGNGG
QSIGFSNLTE HGGFFAGGWK GFLTALCIVV ASYQGVELIG ITAGEAKNPQ VTLRSAVGKV
LWRILIFYVG AIFVIVTIFP WNESGSNGSP FVLTFAKIGI TAAAGIINFV VLTAALSGCN
SGMYSCGRML YALAKNRQLP AAMAKVSRHG VPVAGVAVSI AILLIGSCLN YIIPNPQRVF
VYVYSASVLP GMVPWFVILI SQLRFRRAHK AAIASHPFRS ILFPWANYVT MAFLICVLIG
MYFNEDTRMS LFVGIIFMLA VTAIYKVFGL NRHGKAHKLE E
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