| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4105 |
|---|
| Symbol | yicE |
|---|
| ID | 6271482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3829165 |
|---|
| End bp | 3830556 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641727935 |
|---|
| Product | xanthine permease |
|---|
| Protein accession | YP_001882367 |
|---|
| Protein GI | 187731933 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTT CCACCCTCGA GTCAGAAAAT GCGCAACCGG TTGCGCAGAC TCAAAACAGC
GAACTGATTT ACCGTCTTGA AGATCGTCCG CCGCTTCCTC AAACCCTGTT TGCCGCCTGT
CAGCATCTGC TGGCGATGTT CGTTGCGGTG ATCACGCCAG CGCTATTAAT CTGCCAGGCG
CTGGGTTTAC CGGCACAAGA CACGCAACAC ATTATTAGTA TGTCGCTGTT TGCCTCCGGT
GTGGCATCGA TTATTCAAAT TAAGGCCTGG GGTCCGGTTG GCTCCGGGCT GTTGTCTATT
CAGGGCACCA GCTTCAACTT TGTTGCCCCG CTGATTATGG GCGGTACCGC GCTGAAAACC
GGTGGTGCTG ATGTTCCTAC CATGATGGCG GCTTTGTTCG GCACGTTGAT GCTGGCAAGT
TGCACCGAGA TGGTGATCTC CCGCGTTCTG CATCTGGCGC GCCGCATTAT TACGCCGCTG
GTTTCTGGCG TTGTGGTGAT GATTATCGGC CTGTCGCTAA TTCAGGTTGG GTTAACGTCC
ATTGGCGGCG GTTACGCAGC CATGAGCGAT AACACCTTCG GCGCACCGAA AAATCTGCTG
CTGGCAGGCG TGGTCTTAGC CTTAATTATC CTGCTTAACC GTCAACGTAA CCCTTACTTA
CGCGTGGCCT CACTGGTGAT TGCGATGGCG GCCGGATATG CGCTGGCGTG GTTTATGGGC
ATGTTGCCAG AAAGCAACGA ACCGATGACG CAAGAACTGA TTATGGTGCC AACGCCGCTC
TATTACGGTC TTGGCATTGA ATGGAGTCTG CTGCTGCCGC TGATGCTGGT CTTTATGATC
ACTTCGCTGG AAACCATTGG CGATATCACG TCGACCTCTG ACGTTTCCGA ACAGCCAGTG
TCCGGTCCGC TGTACATGAA ACGCCTGAAA GGCGGCGTGC TGGCAAACGG CCTGAACTCG
TTTGTTTCGG CGGTGTTTAA CACCTTCCCG AACTCCTGCT TCGGGCAAAA CAACGGAGTG
ATCCAGTTGA CTGGTGTTGC CAGCCGCTAT GTCGGTTTTG TCGTCGCGCT GATGTTGATC
GTGCTGGGTC TGTTCCCGGC AGTGAGCGGT TTTGTACAAC ACATTCCAGA ACCGGTTCTG
GGCGGCGCAA CGCTTGTAAT GTTTGGCACC ATCGCCGCCT CCGGTGTGCG TATCGTTTCT
CGTGAGCCGC TGAACCGTCG GGCGATTCTG ATTATCGCGC TGTCGCTGGC GGTTGGTCTG
GGCGTGTCTC AGCAGCCGCT GATTTTGCAG TTTGCCCCTG AATGGCTGAA AAACCTGCTC
TCCTCCGGGA TCGCCGCGGG CGGTATTACT GCCATCGTGC TGAATCTGAT TTTCCCACCA
GAAAAACAGT AA
|
|---|
| Protein sequence | MSVSTLESEN AQPVAQTQNS ELIYRLEDRP PLPQTLFAAC QHLLAMFVAV ITPALLICQA
LGLPAQDTQH IISMSLFASG VASIIQIKAW GPVGSGLLSI QGTSFNFVAP LIMGGTALKT
GGADVPTMMA ALFGTLMLAS CTEMVISRVL HLARRIITPL VSGVVVMIIG LSLIQVGLTS
IGGGYAAMSD NTFGAPKNLL LAGVVLALII LLNRQRNPYL RVASLVIAMA AGYALAWFMG
MLPESNEPMT QELIMVPTPL YYGLGIEWSL LLPLMLVFMI TSLETIGDIT STSDVSEQPV
SGPLYMKRLK GGVLANGLNS FVSAVFNTFP NSCFGQNNGV IQLTGVASRY VGFVVALMLI
VLGLFPAVSG FVQHIPEPVL GGATLVMFGT IAASGVRIVS REPLNRRAIL IIALSLAVGL
GVSQQPLILQ FAPEWLKNLL SSGIAAGGIT AIVLNLIFPP EKQ
|
|---|
| |