Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4068 |
Symbol | rph |
ID | 6270414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3798656 |
End bp | 3799372 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641727908 |
Product | ribonuclease PH |
Protein accession | YP_001882340 |
Protein GI | 187733771 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.010474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCCAG CAGGCCGTAG CAATAATCAG GTGCGTCCCG TTACCCTGAC TCGTAACTAT ACAAAACATG CAGAAGGCTC GGTGCTGGTC GAATTTGGCG ATACCAAAGT GTTGTGTACC GCCTCTATTG AAGAAGGCGT GCCGCGCTTC CTGAAAGGTC AGGGCCAGGG CTGGATCACC GCAGAGTACG GCATGCTGCC ACGTTCTACC CACACCCGTA ACGCTCGTGA AGCGGCGAAA GGTAAGCAGG GTGGACGCAC AATGGAAATC CAGCGTCTGA TCGCCCGTGC TCTTCGCGCG GCAGTAGATT TGAAAGCGCT GGGTGAGTTC ACCATTACGC TGGACTGCGA CGTGCTTCAG GCTGATGGTG GCACGCGTAC CGCGTCGATT ACGGGTGCCT GCGTGGCGCT GGCAGATGCG CTACAGAAGC TGGTGGAAAA CGGCAAGCTG AAAACCAACC CGATGAAAGG GATGGTAGCC GCAGTTTCTG TCGGAATTGT GAACGGCGAA GCGGTTTGCG ATCTGGAATA CGTTGAAGAC TCTGCCGCAG AGACCGACAT GAACGTAGTG ATGACCGAAG ACGGGCGCAT CATTGAAGTG CAGGGGACGG CAGAAGGCGA GCCGTTCACC CATGAAGAGC TACTCACCTT GTTGGCTCTG GCCCGAGGGG GAATCGAATC CATTGTAGCG ACGCAGAAGG CGGCGCTGGC AAACTGA
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Protein sequence | MRPAGRSNNQ VRPVTLTRNY TKHAEGSVLV EFGDTKVLCT ASIEEGVPRF LKGQGQGWIT AEYGMLPRST HTRNAREAAK GKQGGRTMEI QRLIARALRA AVDLKALGEF TITLDCDVLQ ADGGTRTASI TGACVALADA LQKLVENGKL KTNPMKGMVA AVSVGIVNGE AVCDLEYVED SAAETDMNVV MTEDGRIIEV QGTAEGEPFT HEELLTLLAL ARGGIESIVA TQKAALAN
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