Gene SbBS512_E3991 details

Gene Information

• Locus tag: SbBS512_E3991
• Symbol: dppF
• ID: 6269589
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3721785
• End bp: 3722789
• Gene Length: 1005 bp
• Protein Length: 334 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641727837
• Product: dipeptide transporter ATP-binding subunit
• Protein accession: YP_001882269
• Protein GI: 187730066
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4608] ABC-type oligopeptide transport system, ATPase component
• TIGRFAM ID: [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACGC AAGAGGCCAC CCTGCAACAA CCGCTGTTGC AGGCTATCGA CCTGAAAAAA 
CATTATCCGG TGAAGAAAGG CATGTTCGCG CCGGAACGTC TGGTTAAAGC GCTGGATGGC 
GTTTCGTTTA ACCTTGAACG TGGCAAAACG CTGGCAGTAG TGGGCGAATC TGGCTGCGGT 
AAATCGACCC TCGGTCGGTT GCTGACGATG ATTGAAACGC CCACCGGTGG CGAGCTGTAT 
TACCAGGGGC AGGATCTGCT TAAGCACGAT CCGCAGGCGC AGAAGCTGCG TCGGCAGAAA 
ATCCAGATCG TCTTCCAGAA CCCTTACGGT TCGCTGAATC CGCGTAAAAA AGTCGGGCAA 
ATTCTTGAAG AGCCGCTGCT GATCAACACC AGCTTAAGCA AAGAACAGCG TCGGGAAAAA 
GCCCTGTCGA TGATGGCGAA AGTCGGCCTG AAAACCGAGC ACTATGACCG CTATCCGCAT 
ATGTTCTCCG GCGGTCAGCG TCAGCGTATC GCCATCGCCC GTGGTCTGAT GCTCGACCCG 
GATGTGGTGA TTGCCGATGA ACCGGTTTCC GCGCTGGATG TTTCAGTGCG CGCGCAGGTG 
CTGAATCTGA TGATGGATTT GCAGCAGGAG TTGGGGCTGT CTTATGTCTT TATCTCCCAC 
GACCTGTCGG TGGTGGAGCA CATTGCTGAT GAAGTGATGG TGATGTACCT GGGCCGCTGC 
GTGGAGAAGG GAACGAAAGA CCAAATCTTC AATAACCCGC GCCATCCGTA CACTCAGGCG 
CTACTTTCCG CGACGCCGCG CCTGAACCCG GACGATCGCC GCGAGCGCAT CAAGCTCAGC 
GGTGAACTAC CAAGCCCACT GAATCCACCG CCGGGTTGCG CCTTCAACGC CCGCTGTCGT 
CGGCGCTTCG GCCCCTGCAC CCAGTTGCAG CCGCAGCTAA AAGACTACGG CGGTCAACTG 
GTAGCTTGTT TTGCTGTTGA TCAGGATGAA AATCCGCAGC GTTAA 

 

Protein sequence

MSTQEATLQQ PLLQAIDLKK HYPVKKGMFA PERLVKALDG VSFNLERGKT LAVVGESGCG 
KSTLGRLLTM IETPTGGELY YQGQDLLKHD PQAQKLRRQK IQIVFQNPYG SLNPRKKVGQ 
ILEEPLLINT SLSKEQRREK ALSMMAKVGL KTEHYDRYPH MFSGGQRQRI AIARGLMLDP 
DVVIADEPVS ALDVSVRAQV LNLMMDLQQE LGLSYVFISH DLSVVEHIAD EVMVMYLGRC 
VEKGTKDQIF NNPRHPYTQA LLSATPRLNP DDRRERIKLS GELPSPLNPP PGCAFNARCR 
RRFGPCTQLQ PQLKDYGGQL VACFAVDQDE NPQR