Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3979 |
Symbol | |
ID | 6271019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3711388 |
End bp | 3712590 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641727827 |
Product | major facilitator family transporter |
Protein accession | YP_001882260 |
Protein GI | 187730474 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00890] Oxalate/Formate Antiporter |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.705111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCTT CAAATTATCA GCGTACCCGC TGGCTGACAC TCATCGGTAC TATCATTACC CAGTTTGCGC TGGGGTCGGT TTATACCTGG AGTCTGTTTA ATGGCGCGCT TTCTGCCAAG CTGGATGCGC CGGTAAGCCA GGTCGCTTTC TCTTTCGGCT TGTTAAGTCT GGGGCTGGCA ATTTCATCTT CTGTTGCGGG GAAATTACAG GAACGTTTTG GCGTTAAACG CGTCACTATG GCTTCCGGCA TTTTGCTAGG ATTAGGCTTC TTCCTGACAG CGCATTCTGA CAACCTGATG ATGCTGTGGT TAAGCGCCGG TGTGCTGGTC GGTCTGGCGG ATGGCGCGGG TTACCTGCTG ACGCTCTCTA ACTGCGTGAA GTGGTTCCCG GAGCGTAAAG GTCTGATCTC CGCGTTCGCT ATCGGTTCTT ATGGTCTTGG TAGCCTGGGT TTCAAATTTA TCGACACGCA GCTGCTGGAA ACGGTGGGTC TGGAAAAAAC ATTTGTGATT TGGGGAGCGA TTGCGCTGGT GATGATTGTT TTCGGCGCAA CGTTAATGAA AGACGCACCA AAACAGGAAG TGAAAACCAG CAATGGTGTG GTGGAGAAAG ATTACACGCT GGCAGAGTCG ATGCGTAAAC CGCAGTACTG GATGTTAGCG GTAATGTTCC TGACTGCCTG CATGAGCGGC CTGTACGTGA TTGGGGTAGC GAAAGATATC GCCCAAAGTC TGGCACACCT TGATGTGGTT TCCGCAGCCA ATGCAGTAAC GGTTATTTCC ATCGCTAACC TTTCAGGTCG TCTGGTGCTG GGCATTCTGT CTGACAAAAT TGCCCGTATC CGTGTTATCA CCATTGGTCA GGTGATTTCG CTGGTGGGTA TGGCGGCCCT GCTGTTTGCA CCATTAAATG CAGTGACGTT CTTTGCAGCG ATTGCCTGCG TGGCATTTAA CTTTGGCGGC ACTATTACCG TCTTTCCATC ACTGGTCAGT GAGTTCTTCG GCCTCAATAA CCTGGCGAAA AACTACGGTG TGATTTACCT CGGTTTCGGT ATCGGTAGCA TTTTTGGTTC GATTATCGCC TCACTGTTTG GCGGTTTCTA TGTGACCTTC TACGTGATTT TCGCCCTGCT GATTCTGTCA TTGGCGCTTT CTACGACGAT TCGTCAGCCA GAGCAGAAAA TGTTGCGTGA GGCGCATATT TAG
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Protein sequence | MTPSNYQRTR WLTLIGTIIT QFALGSVYTW SLFNGALSAK LDAPVSQVAF SFGLLSLGLA ISSSVAGKLQ ERFGVKRVTM ASGILLGLGF FLTAHSDNLM MLWLSAGVLV GLADGAGYLL TLSNCVKWFP ERKGLISAFA IGSYGLGSLG FKFIDTQLLE TVGLEKTFVI WGAIALVMIV FGATLMKDAP KQEVKTSNGV VEKDYTLAES MRKPQYWMLA VMFLTACMSG LYVIGVAKDI AQSLAHLDVV SAANAVTVIS IANLSGRLVL GILSDKIARI RVITIGQVIS LVGMAALLFA PLNAVTFFAA IACVAFNFGG TITVFPSLVS EFFGLNNLAK NYGVIYLGFG IGSIFGSIIA SLFGGFYVTF YVIFALLILS LALSTTIRQP EQKMLREAHI
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