Gene SbBS512_E3972 details

Gene Information

• Locus tag: SbBS512_E3972
• ID: 6268491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3704352
• End bp: 3705062
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641727820
• Product: putative lipoprotein
• Protein accession: YP_001882253
• Protein GI: 187730636

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGACAG GAAAGTCCTG CTCTCGCTGG TTTGCGCCTC TTGCGGCGTT ATTAATGGTA 
GTTAGCCTGA GTGGGTGTTT TGATAAAGAA GGCGATCAGC GTAAAGCGTT TATCGACTTC 
CTGCAGAATA CAGTGATGCG TAGCGGTGAA CGTCTACCAA CCCTGACTGC CGATCAGAAA 
AAACAGTTTG GTCCTTTTGT CTCTGATTAC GCGATTCTGT ATGGTTATTC TCAGCAGGTG 
AATCAGGCGA TGGATTCCGG TCTGCGCCCG GTCGTAGACA GCGTTAACGC AATTCGCGTA 
CCGCAGGATT ACGTTACGCA AAGCGGTCCG CTGCGTGAAA TGAACGGTTC GCTGGGTGTG 
CTGGCGCAAC AACTGCAAAA TGCGAAGTTG CAGGCCGATG CTGCGCACTC TGCGCTAAAA 
CAGACCGATG ATTTGAAACC GGTCTTTGAT CAGGCATTCA CCAAAGTGGT AACGACGCCA 
GCTGATGCAT TGCAACCGTT GATTCCGGTT GCACAAACTT TCACGCAACA ACTGGTGATG 
GTTGGAGACT ACATTGCTCA ACAAGGTACT CAGGTGAGCT TTGTAGCAAA TGGTATCCAG 
TTCCCGACTT CGCAGCAGGC AAGTGAATAT AACAAACTGA TTGCGCCGTT ACCGGCACAA 
CATCAGGCGT TTAATCAGGC CTGGACTACA GCAGTTACTG CAACCCAATA A 

 

Protein sequence

MATGKSCSRW FAPLAALLMV VSLSGCFDKE GDQRKAFIDF LQNTVMRSGE RLPTLTADQK 
KQFGPFVSDY AILYGYSQQV NQAMDSGLRP VVDSVNAIRV PQDYVTQSGP LREMNGSLGV 
LAQQLQNAKL QADAAHSALK QTDDLKPVFD QAFTKVVTTP ADALQPLIPV AQTFTQQLVM 
VGDYIAQQGT QVSFVANGIQ FPTSQQASEY NKLIAPLPAQ HQAFNQAWTT AVTATQ