Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3886 |
Symbol | |
ID | 6272166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3609547 |
End bp | 3610242 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641727741 |
Product | pirin family protein |
Protein accession | YP_001882175 |
Protein GI | 187731233 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.688116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTACT TACGCAAAGC AAATGAACGT GGTCATGCAA ATCATGGCTG GCTGGATTCC TGGCATACTT TCTCTTTTGC CAACTATTAC GATCCGAACT TTATGGGCTT CTCCGCGCTG CGCGTGATTA ACGACGACGT GATTGAAGCA GGGCAGGGCT TCGGCACTCA CCCGCATAAA GATATGGAAA TTTTGACCTA CGTGCTGGAA GGTACTGTTG AGCATCAGGA CAGCATGGGC AATAAAGAGC AGGTTCCGGC GGGTGAGTTC CAGATTATGA GTGCGGGTAC GGGTATTCGT CACTCAGAGT ACAACCCAAG CAGCACCGAG CGTCTGCATC TGTATCAGAT CTGGATCATG CCTGAAGAAA ACGGTATTAC GCCGCGTTAT GAACAGCGTC GCTTCGATGC CGTACAGGGC AAACAGCTGG TGCTCTCGCC GGATGCGCGA GATGGTTCAT TGAAAGTGCA TCAGGATATG GAACTGTACC GCTGGGCGTT GCTGAAAGAT GAGCAGTCGG TGCATCAGAT TGCCGCTGAA CGCCGCGTCT GGATCCAGGT GGTGAAAGGC AATGTCACCA TTAACGGCGT GAAAGCCTCG ACCAGCGATG GTCTGGCAAT CTGGGATGAG CAGGCAATCT CCATCCATGC GGATAGCGAC AGCGAAGTGT TACTGTTCGA TCTGCCGCCG GTTTAA
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Protein sequence | MIYLRKANER GHANHGWLDS WHTFSFANYY DPNFMGFSAL RVINDDVIEA GQGFGTHPHK DMEILTYVLE GTVEHQDSMG NKEQVPAGEF QIMSAGTGIR HSEYNPSSTE RLHLYQIWIM PEENGITPRY EQRRFDAVQG KQLVLSPDAR DGSLKVHQDM ELYRWALLKD EQSVHQIAAE RRVWIQVVKG NVTINGVKAS TSDGLAIWDE QAISIHADSD SEVLLFDLPP V
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