| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3861 |
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| Symbol | rpoH |
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| ID | 6271915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3586604 |
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| End bp | 3587458 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641727717 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001882152 |
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| Protein GI | 187730400 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGACA AAATGCAAAG TTTAGCTTTA GCCCCAGTTG GCAACCTGGA TTCCTACATC
CGGGCAGCTA ACGCGTGGCC GATGTTGTCG GCTGACGAGG AGCGGGCGCT GGCTGAAAAG
CTGCATTACC ATGGCGATCT GGAAGCAGCT AAAACGCTGA TCCTGTCTCA CCTGCGGTTT
GTTGTTCATA TTGCTCGTAA TTATGCGGGC TATGGCCTGC CACAGGCGGA TTTGATTCAG
GAAGGTAACA TCGGCCTGAT GAAAGCAGTG CGCCGTTTCA ACCCGGAAGT GGGTGTGCGC
TTGGTCTCCT TCGCCGTTCA CTGGATCAAA GCAGAGATCC ACGAATACGT TCTGCGTAAC
TGGCGTATCG TCAAAGTTGC GACCACCAAA GCGCAGCGCA AACTGTTCTT CAACCTGCGT
AAAACTAAGC AGCGTCTGGG CTGGTTTAAC CAGGATGAAG TCGAAATGGT GGCCCGTGAA
CTGGGCGTAA CCAGCAAAGA CGTTCGTGAG ATGGAATCAC GTATGGCGGC ACAGGACATG
ACCTTTGACC TGTCTTCCGA CGACGATTCC GACAGCCAGC CGATGGCACC GGTGCTCTAT
CTGCAGGATA AATCATCTAA CTTTGCCGAC GGCATCGAAG ATGATAACTG GGAAGAGCAG
GCGGCAAACC GTCTGACCGA CGCGATGCAA GGTCTGGACG AACGCAGCCA GGACATCATC
CGCGCGCGCT GGCTGGACGA AGACAACAAG TCCACGTTGC AGGAACTGGC TGACCGTTAC
GGTGTTTCCG CTGAACGTGT ACGCCAGCTG GAAAAGAACG CGATGAAAAA ACTGCGCGCT
GCTATAGAAG CGTAA
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| Protein sequence | MTDKMQSLAL APVGNLDSYI RAANAWPMLS ADEERALAEK LHYHGDLEAA KTLILSHLRF
VVHIARNYAG YGLPQADLIQ EGNIGLMKAV RRFNPEVGVR LVSFAVHWIK AEIHEYVLRN
WRIVKVATTK AQRKLFFNLR KTKQRLGWFN QDEVEMVARE LGVTSKDVRE MESRMAAQDM
TFDLSSDDDS DSQPMAPVLY LQDKSSNFAD GIEDDNWEEQ AANRLTDAMQ GLDERSQDII
RARWLDEDNK STLQELADRY GVSAERVRQL EKNAMKKLRA AIEA
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