Gene SbBS512_E3705 details

Gene Information

• Locus tag: SbBS512_E3705
• Symbol: rplC
• ID: 6273163
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3434300
• End bp: 3434929
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641727569
• Product: 50S ribosomal protein L3
• Protein accession: YP_001882004
• Protein GI: 187733677
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000000030519
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGTT TAGTCGGTAA AAAAGTGGGT ATGACCCGTA TCTTCACAGA AGACGGCGTT 
TCTATCCCAG TAACCGTAAT CGAAGTTGAA GCAAACCGCG TTACTCAGGT TAAAGACCTG 
GCTAACGATG GCTACCGTGC TATTCAGGTG ACCACCGGTG CTAAAAAAGC TAACCGTGTG 
ACCAAGCCTG AAGCTGGCCA CTTCGCTAAA GCTGGCGTAG AAGCTGGCCG TGGTCTGTGG 
GAATTCCGCC TGGCTGAAGG CGAAGAGTTC ACTGTAGGTC AGAGCATTAG CGTTGAACTG 
TTTGCTGACG TTAAAAAAGT TGACGTAACT GGCACCTCTA AAGGTAAAGG TTTCGCAGGT 
ACCGTTAAGC GCTGGAACTT CCGTACCCAG GACGCTACTC ACGGTAACTC CTTGTCTCAC 
CGCGTTCCGG GTTCTATCGG TCAGAACCAG ACTCCGGGCA AAGTGTTCAA AGGCAAGAAA 
ATGGCAGGTC AGATGGGTAA CGAACGTGTA ACCGTTCAGA GCCTTGACGT AGTACGCGTT 
GACGCTGAGC GCAACCTGCT GCTGGTTAAA GGTGCTGTCC CGGGTGCAAC CGGTAGCGAC 
CTGATCGTTA AACCAGCTGT GAAGGCGTAA 

 

Protein sequence

MIGLVGKKVG MTRIFTEDGV SIPVTVIEVE ANRVTQVKDL ANDGYRAIQV TTGAKKANRV 
TKPEAGHFAK AGVEAGRGLW EFRLAEGEEF TVGQSISVEL FADVKKVDVT GTSKGKGFAG 
TVKRWNFRTQ DATHGNSLSH RVPGSIGQNQ TPGKVFKGKK MAGQMGNERV TVQSLDVVRV 
DAERNLLLVK GAVPGATGSD LIVKPAVKA