Gene SbBS512_E3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3704 
SymbolrplD 
ID6271794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp3433684 
End bp3434289 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content53% 
IMG OID641727568 
Product50S ribosomal protein L4 
Protein accessionYP_001882003 
Protein GI187732957 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0000000112699 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAG TATTGAAAGA CGCGCAGAGC GCGCTGACTG TTTCCGAAAC TACCTTCGGT 
CGTGATTTCA ACGAAGCGCT GGTTCACCAG GTTGTTGTTG CTTATGCAGC TGGTGCTCGT 
CAGGGTACTC GTGCTCAGAA GACTCGTGCT GAAGTAACTG GTTCCGGTAA AAAACCGTGG 
CGCCAGAAAG GCACCGGCCG TGCGCGTTCT GGTTCTATCA AGAGCCCGAT CTGGCGTTCT 
GGTGGCGTGA CCTTTGCTGC TCGTCCGCAG GACCACAGTC AAAAAGTTAA CAAGAAGATG 
TACCGCGGCG CGCTGAAAAG CATCCTGTCC GAACTGGTAC GTCAGGATCG TCTGATCGTT 
GTCGAGAAGT TCTCTGTAGA AGCGCCGAAA ACTAAGCTGC TGGCACAGAA ACTGAAAGAC 
ATGGCTCTGG AAGATGTGCT GATCATCACC GGTGAGCTGG ACGAAAACCT GTTCCTGGCT 
GCGCGCAACC TGCACAAGGT TGACGTACGC GATGCAACTG GTATCGACCC GGTTAGCCTG 
ATCGCCTTCG ACAAAGTCGT AATGACTGCT GATGCTGTTA AGCAAGTTGA GGAGATGCTG 
GCATGA
 
Protein sequence
MELVLKDAQS ALTVSETTFG RDFNEALVHQ VVVAYAAGAR QGTRAQKTRA EVTGSGKKPW 
RQKGTGRARS GSIKSPIWRS GGVTFAARPQ DHSQKVNKKM YRGALKSILS ELVRQDRLIV 
VEKFSVEAPK TKLLAQKLKD MALEDVLIIT GELDENLFLA ARNLHKVDVR DATGIDPVSL 
IAFDKVVMTA DAVKQVEEML A