| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3688 |
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| Symbol | rpsE |
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| ID | 6272676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3426729 |
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| End bp | 3427232 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641727552 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001881987 |
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| Protein GI | 187732964 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000000204497 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCACA TCGAAAAACA AGCTGGCGAA CTGCAGGAAA AGCTGATCGC GGTAAACCGC
GTATCTAAAA CCGTTAAAGG TGGTCGTATT TTCTCCTTCA CAGCTCTGAC TGTAGTTGGC
GATGGTAACG GTCGCGTTGG TTTTGGTTAC GGTAAAGCGC GTGAAGTTCC AGCAGCGATC
CAGAAAGCGA TGGAAAAAGC CCGTCGCAAT ATGATTAACG TCGCGCTGAA TAACGGCACT
CTGCAACACC CTGTTAAAGG TGTTCACACG GGTTCTCGCG TATTCATGCA GCCGGCTTCC
GAAGGTACCG GTATCATCGC CGGTGGTGCA ATGCGCGCCG TTCTGGAAGT CGCTGGGGTT
CATAACGTTC TGGCTAAAGC ATATGGTTCC ACCAACCCGA TCAACGTGGT TCGTGCAACT
ATTGATGGCC TGGAAAATAT GAATTCTCCA GAAATGGTCG CTGCCAAGCG TGGTAAATCC
GTTGAAGAAA TTCTGGGGAA ATAA
|
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| Protein sequence | MAHIEKQAGE LQEKLIAVNR VSKTVKGGRI FSFTALTVVG DGNGRVGFGY GKAREVPAAI
QKAMEKARRN MINVALNNGT LQHPVKGVHT GSRVFMQPAS EGTGIIAGGA MRAVLEVAGV
HNVLAKAYGS TNPINVVRAT IDGLENMNSP EMVAAKRGKS VEEILGK
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