Gene SbBS512_E3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3674 
SymboltrkA 
ID6272495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3416071 
End bp3417447 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content50% 
IMG OID641727538 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_001881973 
Protein GI187732720 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA TCATTCTGGG TGCCGGCCAG GTTGGCGGCA CACTGGCGGA AAACCTGGTT 
GGCGAGAACA ACGATATTAC TGTTGTCGAT ACCAACGGTG AGCGTCTGCG GACCTTGCAG
GATAAATTTG ACCTGCGAGT CGTGCAGGGG CATGGCTCTC ATCCACGCGT ATTGCGGGAG
GCAGGTGCCG ACGACGCCGA TATGCTGGTT GCTGTAACCA GTTCAGATGA AACCAATATG
GTTGCCTGCC AGGTAGCCTA CTCACTTTTC AACACCCCTA ATCGCATCGC TCGCATCCGC
TCACCAGACT ACGTACGCGA TGCCGATAAG CTATTTCATT CAGATGCTGT ACCGATTGAT
CATCTGATCG CACCAGAGCA GTTGGTTATC GATAATATTT ACCGACTGAT TGAGTATCCA
GGCGCATTGC AGGTGGTGAA CTTCGCTGAG GGTAAAGTCA GCCTCGCTGT AGTTAAAGCC
TATTATGGCG GCCCGCTGAT TGGTAATGCA CTTTCGACCA TGCGCGAACA TATGCCACAT
ATCGATACTC GTGTGGCAGC AATTTTCCGC CACGATCGCC CCATTCGTCC ACAAGGTTCG
ACCATTGTTG AAGCTGGTGA TGAAGTGTTC TTTATTGCCG CTTCACAGCA TATCCGCGCG
GTGATGAGTG AATTACAGCG ACTGGAAAAA CCGTATAAGC GGATCATGCT GGTTGGTGGC
GGTAATATCG GTGCAGGGCT GGCGCGTCGT CTGGAAAAAG ATTACAGCGT TAAACTCATC
GAACGTAATC AGCAGCGCGC TGCCGAACTG GCGGAAAAGT TGCAGAATAC GATCGTCTTT
TTTGGTGATG CGTCGGATCA AGAACTGCTG GCCGAAGAAC ATATCGATCA AGTTGATCTG
TTTATTGCCG TCACCAACGA TGACGAGGCC AATATCATGT CCGCCATGCT TGCCAAACGT
ATGGGTGCGA AAAAGGTGAT GGTATTGATC CAGCGTCGCG CTTATGTGGA TCTGGTTCAG
GGGAGCGTGA TCGATATTGC AATTTCACCA CAACAAGCAA CTATTTCTGC GTTGCTTAGC
CATGTGCGAA AAGCAGATAT TGTTGGTGTT TCCTCATTGC GCCGCGGCGT AGCAGAAGCT
ATTGAAGCCG TTGCTCACGG TGATGAAAGC ACCTCACGCG TTGTCGGCAG AGTCATTGAC
GAAATCAAGC TACCGCCAGG AACGATTATT GGAGCGGTGG TACGTGGAAA CGACGTGATG
ATTGCCAATG ACAATCTGCG CATTGAGCAA GGCGATCACG TAATTATGTT CCTCACAGAT
AAAAAGTTTA TTACCGACGT CGAAAGACTC TTCCAGCCAA GCCCTTTCTT CTTGTAA
 
Protein sequence
MKIIILGAGQ VGGTLAENLV GENNDITVVD TNGERLRTLQ DKFDLRVVQG HGSHPRVLRE 
AGADDADMLV AVTSSDETNM VACQVAYSLF NTPNRIARIR SPDYVRDADK LFHSDAVPID
HLIAPEQLVI DNIYRLIEYP GALQVVNFAE GKVSLAVVKA YYGGPLIGNA LSTMREHMPH
IDTRVAAIFR HDRPIRPQGS TIVEAGDEVF FIAASQHIRA VMSELQRLEK PYKRIMLVGG
GNIGAGLARR LEKDYSVKLI ERNQQRAAEL AEKLQNTIVF FGDASDQELL AEEHIDQVDL
FIAVTNDDEA NIMSAMLAKR MGAKKVMVLI QRRAYVDLVQ GSVIDIAISP QQATISALLS
HVRKADIVGV SSLRRGVAEA IEAVAHGDES TSRVVGRVID EIKLPPGTII GAVVRGNDVM
IANDNLRIEQ GDHVIMFLTD KKFITDVERL FQPSPFFL