| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3575 |
|---|
| Symbol | |
|---|
| ID | 6270047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3328665 |
|---|
| End bp | 3329474 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641727445 |
|---|
| Product | putative ABC transporter ATP-binding protein YrbF |
|---|
| Protein accession | YP_001881890 |
|---|
| Protein GI | 187730586 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.637891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGT CTGTGGCGAA TTTAGTCGAT ATGCGCGATG TCAGTTTTAC GCGTGGCAAT
CGCTGCATCT TCGATAATAT TTCCCTGACC GTGCCGCGAG GGAAGATCAC GGCGATCATG
GGGCCATCGG GCATCGGTAA AACGACGCTA CTCCGTCTGA TTGGCGGGCA AATCGCACCA
GATCATGGTG AGATCCTTTT CGATGGTGAG AATATTCCGG CGATGTCTCG TTCGCGCCTG
TATACAGTGC GCAAACGGAT GAGCATGTTA TTTCAGTCCG GGGCGTTGTT CACTGATATG
AACGTATTTG ACAACGTCGC CTATCCACTG CGCGAACATA CCCAACTTCC CGCGCCATTG
TTGCATAGTA CGGTGATGAT GAAGCTGGAG GCCGTGGGGC TGCGTGGAGC GGCTAAACTA
ATGCCTTCTG AACTTTCCGG TGGGATGGCG CGGCGTGCAG CGCTGGCGCG TGCGATTGCG
CTGGAGCCGG ATCTCATCAT GTTTGATGAA CCTTTTGTTG GGCAAGATCC CATCACCATG
GGCGTACTGG TGAAGCTGAT TTCTGAGCTG AACAGCGCGC TGGGCGTGAC TTGTGTGGTG
GTTTCTCACG ATGTGCCGGA AGTGTTAAGT ATTGCGGATC ACGCCTGGAT CCTGGCGGAC
AAAAAAATTG TCGCTCATGG CAGTGCCCAG GCGTTGCAGG CGAATCCTGA TCCGCGCGTA
CGTCAGTTTC TGGACGGGAT AGCTGACGGG CCTGTTCCGT TCCGCTATCC TGCCGGCGAT
TATCACGCTG ATCTTTTACC AGGGAGTTAA
|
|---|
| Protein sequence | MEQSVANLVD MRDVSFTRGN RCIFDNISLT VPRGKITAIM GPSGIGKTTL LRLIGGQIAP
DHGEILFDGE NIPAMSRSRL YTVRKRMSML FQSGALFTDM NVFDNVAYPL REHTQLPAPL
LHSTVMMKLE AVGLRGAAKL MPSELSGGMA RRAALARAIA LEPDLIMFDE PFVGQDPITM
GVLVKLISEL NSALGVTCVV VSHDVPEVLS IADHAWILAD KKIVAHGSAQ ALQANPDPRV
RQFLDGIADG PVPFRYPAGD YHADLLPGS
|
|---|
| |