Gene SbBS512_E3555 details

Gene Information

• Locus tag: SbBS512_E3555
• ID: 6271071
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3306562
• End bp: 3307026
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641727425
• Product: hypothetical protein
• Protein accession: YP_001881871
• Protein GI: 187732159
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2731] Beta-galactosidase, beta subunit
• TIGRFAM ID: [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGATGG GTGAAGTACA GTCATTACCG TCTGCTGGGT TACATCCTGC GTTACAGGAC 
GCGTTAACGC TGGCATTAGC TGCCAGACCG CAAGAAAAAG CGCCGGGTCG TTACGAATTA 
CAGGGCGACA ATATCTTTAT GAATGTCATG ACGTTTAACA CTCAATCGCC CGTCGAGAAA 
AAAGCGGAAT TGCACGAGCA ATACATTGAT ATCCAGCTGT TATTAAACGG TGAGGAACGG 
ATTCTGTTTG GCATGGCAGG CACTGCGCGC CAGTGTGAAG AGTTCCACCA TGAGGATGAT 
TATCAGCTTT GCAGCACCAT TGATAACGAG CAAGCCATCA TCTTAAAACC GGGAATGTTC 
GCCGTGTTTA TGCCAAGTGA ACCGCATAAA CCAGGATGCG TTGTCGGCGA GCCGGGTGAG 
ATTAAAAAGG TGGTGGTGAA GGTTAAGGCT GATTTAATGG CTTAA 

 

Protein sequence

MMMGEVQSLP SAGLHPALQD ALTLALAARP QEKAPGRYEL QGDNIFMNVM TFNTQSPVEK 
KAELHEQYID IQLLLNGEER ILFGMAGTAR QCEEFHHEDD YQLCSTIDNE QAIILKPGMF 
AVFMPSEPHK PGCVVGEPGE IKKVVVKVKA DLMA