Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3547 |
Symbol | sspA |
ID | 6272501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3298621 |
End bp | 3299259 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727418 |
Product | stringent starvation protein A |
Protein accession | YP_001881864 |
Protein GI | 187732794 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000000170112 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTCG CTGCCAACAA ACGTTCGGTA ATGACGCTGT TTTCCGGTCC TACTGACATC TATAGCCATC AGGTCCGCAT TGTGCTGGCT GAGAAAGGTG TAAGTTTCGA GATCGAACAC GTGGAAAAGG ACAATCCGCC TCAGGATCTG ATTGACCTCA ACCCGAATCA GAGCGTTCCG ACCCTGGTGG ATCGTGAGCT GACCCTGTGG GAATCTCGCA TCATTATGGA ATATCTGGAT GAGCGTTTCC CGCATCCGCC ACTGATGCCT GTTTACCCGG TAGCTCGCGG TGAAAGCCGT CTGTACATGC ATCGCATCGA AAAAGACTGG TACACGCTGA TGAACACCAT CATCAACGGT TCAGCTTCTG AAGCAGATGC CGCACGTAAG CAACTGCGCG AAGAACTGCT GGCGATTGCG CCGGTCTTCG GTCAGAAGCC GTACTTCCTG AGCGATGAGT TCAGCCTGGT CGATTGCTAT CTTGCTCCGC TGCTGTGGCG TCTGCCGCAA CTGGGCATCG AGTTCAGCGG CCCGGGTGCG AAAGAGCTGA AAGGCTATAT GACCCGCGTC TTTGAGCGTG ACTCTTTCCT TGCTTCTTTA ACTGAAGCAG AACGTGAAAT GCGTCTGGGC CGGAGTTAA
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Protein sequence | MAVAANKRSV MTLFSGPTDI YSHQVRIVLA EKGVSFEIEH VEKDNPPQDL IDLNPNQSVP TLVDRELTLW ESRIIMEYLD ERFPHPPLMP VYPVARGESR LYMHRIEKDW YTLMNTIING SASEADAARK QLREELLAIA PVFGQKPYFL SDEFSLVDCY LAPLLWRLPQ LGIEFSGPGA KELKGYMTRV FERDSFLASL TEAEREMRLG RS
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