Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3529 |
Symbol | exuT |
ID | 6272040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3283102 |
End bp | 3284400 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727404 |
Product | hexuronate transporter |
Protein accession | YP_001881850 |
Protein GI | 187731471 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAAAA TTAAAGGGTT ACGTTGGTAT ATGATCGCAC TGGTGACGCT TGGCACCGTG CTTGGTTACC TGACGCGTAA CACTGTGGCG GCAGCTGAGC CAACTCTGAT GGAAGAGTTA AACATCTCCA CCCAACAGTA TTTCTATATC ATCGCAGCCT ATTCTGCTGC TTATACGGTC ATGCAACCGG TAGCGGGCTA TGTACTGGAT GTGCTGGGTA CGAAAATCGG TTATGCAATG TTTGCTGTAC TGTGGGCCGT ATTCTGTGGT GCAACCGCGC TGGCTGGTAG CAGGGGTGGC CTGGCGATTG CTCGTGGTGC AGTCGGTGCC GCGGAAGCAG CGATGATCCC GGCGGGTCTG AAAGCCAGCT CCGAATGGTT CCCGGCGAAA GAGCGTTCCA TCGCGGTAGG TTACTTTAAC GTAGGTTCTT CGATTGGTGC GATGATTGCG CCGCCGCTGG TGGTATGGGC AATCGTAATG CACAGCTGGC AGATGGCATT TATCATCTCC GGTGCATTGA GCTTTATCTG GGCGATGGCA TGGCTGATTT TCTATAAACA TCCGCGCGAC CAGAAGCATC TGACCGATGA AGAACGCGAC TATATTATTA ATGGTCAGGA AGCCCAGCAC CAGGTGAGCA CGGCGAAGAA AATGTCCGTT GGTCAGATCC TGCGTAACCG TCAGTTCTGG GGTATCGCGC TGCCGCGTTT CCTGGCAGAA CCAGCCTGGG GTACTTTTAA CGCGTGGATC CCGCTGTTCA TGTTTAAAGT TTACGGCTTT AACCTGAAAG AGATCGCGAT GTTCGCCTGG ATGCCGATGC TGTTTGCTGA CCTCGGTTGT ATCCTCGGTG GTTACCTGCC GCCGCTGTTC CAACGTTGGT TTGGTGTGAA CCTGATCGTT TCCCGTAAGA TGGTCGTAAC GCTGGGTGCA GTGCTGATGA TTGGCCCGGG TATGATCGGC CTGTTCACCA ACCCGTATGT CGCAATTATG CTGCTGTGTA TCGGTGGTTT TGCTCATCAG GCACTGTCTG GCGCGCTGAT TACGCTCTCT TCTGACGTGT TCGGTCGTAA CGAAGTGGCG ACGGCGAACG GTTTAACCGG GATGTCCGCA TGGCTGGCAA GTACGCTGTT TTCGCTGGTT GTCGGTGCAC TGGCTGACAC CATCGGCTTC AGCCCGCTGT TCGCAGTACT GGCAGTGTTC GACCTGTTAG GTGCGCTGGT TATCTGGACC GTGTTGCAGA ACAAACCGGC GATTGAGGTA GCGCAGGAAT CACATAACGA TCCCGCACCG CAACATTAA
|
Protein sequence | MRKIKGLRWY MIALVTLGTV LGYLTRNTVA AAEPTLMEEL NISTQQYFYI IAAYSAAYTV MQPVAGYVLD VLGTKIGYAM FAVLWAVFCG ATALAGSRGG LAIARGAVGA AEAAMIPAGL KASSEWFPAK ERSIAVGYFN VGSSIGAMIA PPLVVWAIVM HSWQMAFIIS GALSFIWAMA WLIFYKHPRD QKHLTDEERD YIINGQEAQH QVSTAKKMSV GQILRNRQFW GIALPRFLAE PAWGTFNAWI PLFMFKVYGF NLKEIAMFAW MPMLFADLGC ILGGYLPPLF QRWFGVNLIV SRKMVVTLGA VLMIGPGMIG LFTNPYVAIM LLCIGGFAHQ ALSGALITLS SDVFGRNEVA TANGLTGMSA WLASTLFSLV VGALADTIGF SPLFAVLAVF DLLGALVIWT VLQNKPAIEV AQESHNDPAP QH
|
| |