Gene SbBS512_E3522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3522 
Symbol 
ID6269846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp3274209 
End bp3274892 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content51% 
IMG OID641727397 
Productputative SanA protein 
Protein accessionYP_001881843 
Protein GI187731370 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCCC GCCTTCTTCT CCGTATTTGT TTTTCTCGCC GGACTCTAAA GATTGCCTGC 
TTACTGTTAC TTGTGGCAGG AGCGACCATT TTTATCGCCG ATCGAGTAAT GGTCAACGCC 
AGCAAGCAGC TGACCTGGAG CGATGTCAAC GCAGTTCCGG CGCGTAACGT GGGCTTATTG 
CTGGGGGCCA GGCCGGGTAA TCGCTACTTT ACCCGACGTA TTGATACCGC AGCAGCGTTG 
TACCACGCCG GAAAAGTGAA ATGGCTACTG GTAAGTGGCG ATAACGGACG TAAAAATTAC 
GATGAAGCAT CAGGTATGCA GAAGGCTTTG ATCGCTAAAG GCGTACCGGC GAAAGTGATC 
TTCTGCGACT ATGCCGGATT CTCAACGCTG GATTCGGTAG TGCGTGCCAA AAAGGTTTTT 
GGTGAAAACC ATATCACCAT TATCTCGCAA GAATTTCATA ACCAACGCGC CATCTGGCTG 
GCAAAACAGT ACAGCATCGA CGCTATCGGT TTTAACGCGC CTGACCTCAA TATGAAGCAC 
GGTTTTTATA CTCAACTGCG GGAGAAACTC GCTCGTGTCA GCGCCGTGAT TGACGCCAAA 
ATCCTCCATC GCCAGCCGAA ATATCTCGGG CCATCGGTCA TGATTGGGCC GTTTAGTGAG 
CATGGCTGTC CGGCAAAAGA ATAA
 
Protein sequence
MQPRLLLRIC FSRRTLKIAC LLLLVAGATI FIADRVMVNA SKQLTWSDVN AVPARNVGLL 
LGARPGNRYF TRRIDTAAAL YHAGKVKWLL VSGDNGRKNY DEASGMQKAL IAKGVPAKVI 
FCDYAGFSTL DSVVRAKKVF GENHITIISQ EFHNQRAIWL AKQYSIDAIG FNAPDLNMKH 
GFYTQLREKL ARVSAVIDAK ILHRQPKYLG PSVMIGPFSE HGCPAKE