| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3459 |
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| Symbol | qseB |
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| ID | 6272104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3215227 |
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| End bp | 3215886 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641727344 |
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| Product | DNA-binding transcriptional regulator QseB |
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| Protein accession | YP_001881793 |
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| Protein GI | 187731798 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.469494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAATTT TACTGATAGA AGATGACATG CTGATTGGCG ACGGCATCAA AACTGGCCTT
AGTAAAATGG GTTTTAGTGT CGACTGGTTT ACACAAGGTC GTCAGGGAAA AGAGGCGCTT
TATAGCGCAC CTTATGATGC GGTGATCCTG GATTTAACCT TACCAGGCAT GGATGGTCGC
GATATTTTGC GTGAATGGCG AGAGAAAGGT CAGCGTGAGC CGGTACTGAT CCTGACCGCG
CGTGATGCGT TAGCGGAACG TGTAGAAGGG CTGCGTCAGG GAGCTGACGA TTATCTGTGT
AAACCTTTTG CGTTGATAGA AGTCGCCGCC AGGCTGGAGG CTCTGATGCG CCGAACCAAC
GGCCAGGCCA GCAACGAGCT GCGCCACGGT AACGTCATGC TCGACCCCGG CAAACGTATC
GCCACGCTGG CTGGCGAACC CTTAACACTG AAACCAAAAG AATTTGCCCT GCTGGAATTA
CTGATGCGTA ACGCTGGTCG GGTACTACCG CGCAAACTGA TTGAAGAGAA ACTGTATACC
TGGGACGAAG AGGTCACCAG TAATGCCGTT GAAGTGCATG TGCATCATCT GCGACGCAAA
CTCGGTAGTG ATTTTATTCG TACCGTGCAT GGTATTGGCT ACACATTAGG TGAGAAATGA
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| Protein sequence | MRILLIEDDM LIGDGIKTGL SKMGFSVDWF TQGRQGKEAL YSAPYDAVIL DLTLPGMDGR
DILREWREKG QREPVLILTA RDALAERVEG LRQGADDYLC KPFALIEVAA RLEALMRRTN
GQASNELRHG NVMLDPGKRI ATLAGEPLTL KPKEFALLEL LMRNAGRVLP RKLIEEKLYT
WDEEVTSNAV EVHVHHLRRK LGSDFIRTVH GIGYTLGEK
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