| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3378 |
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| Symbol | rsmE |
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| ID | 6269932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3144365 |
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| End bp | 3145096 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641727269 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001881719 |
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| Protein GI | 187732729 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTATCC CCCGCATTTA TCATCCTGAA CCACTGACCA GCCATTCTCA CATCGCGCTT
TGCGAAGATG CCGCCAACCA TATCGGGCGC GTACTGCGCA TGGGGCCGGG GCAGGCGTTG
CAATTGTTTG ACGGTAGCAA CCAGGTCTTT GACGCCGAAA TTACCAGCGC CAGCAAAAAA
AGCGTGGAAG TGAAGGTGCT GGAAGGCAAG ATCGACGATC GCGAATCTCC GCTGCATATT
CACCTCGGTC AGGTGATGTC GCGTGGTGAA AAAATGGAAT TTACGATCCA GAAATCGATC
GAACTCGGTG TAAGCCTCAT TACGCCACTT TTTTCTGAGC GCTGCGGCGT TAAACTGGAT
AGTGAACGTC TGAACAAGAA GCTCCAGCAG TGGCAGAAGA TTGCAATTGC TGCCTGTGAG
CAGTGTGGTC GTAACCGGGT GCCGGAAATC CGTCCAGCGA TGGATCTGGA AGCCTGGTGT
GCAGAGCAGG ATGAAGGACT GAAACTGAAT CTTCACCCGC GCGCCAGTAA CAGCATCAAT
ACGTTGCCGT TACCGGTTGA ACGCGTCCGC CTGCTGATTG GCCCGGAAGG CGGTTTATCG
GCAGATGAAA TTGCCATGAC TGCCCGCTAT CAATTTACTG ATATCCTGTT GGGACCTCGC
GTTTTGCGTA CAGAGACAAC TGCGCTCACC GCCATTACCG CGCTACAAGT ACGATTTGGC
GATTTGGGCT AA
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| Protein sequence | MRIPRIYHPE PLTSHSHIAL CEDAANHIGR VLRMGPGQAL QLFDGSNQVF DAEITSASKK
SVEVKVLEGK IDDRESPLHI HLGQVMSRGE KMEFTIQKSI ELGVSLITPL FSERCGVKLD
SERLNKKLQQ WQKIAIAACE QCGRNRVPEI RPAMDLEAWC AEQDEGLKLN LHPRASNSIN
TLPLPVERVR LLIGPEGGLS ADEIAMTARY QFTDILLGPR VLRTETTALT AITALQVRFG
DLG
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