Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3234 |
Symbol | garK |
ID | 6272185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3015352 |
End bp | 3016497 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641727146 |
Product | glycerate kinase I |
Protein accession | YP_001881599 |
Protein GI | 187731510 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1929] Glycerate kinase |
TIGRFAM ID | [TIGR00045] glycerate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCG TAATCGCCCC AGACTCTTAT AAAGAAAGTT TATCTGCCAG CGAGGTTGCG CAGGCGATAG AAAAAGGATT TCGGGAAATT TTTCCTGATG CACAGTACGT TTCTGTTCCG GTTGCCGACG GTGGCGAAGG AACGGTGGAA GCGATGATTG CAGCCACCCA GGGTTCCGAA CGTCACGCCT GGGTTACAGG GCCGTTGGGC GAGAAAGTGA ATGCCAGTTG GGGGATCTCC GGCGATGGCA AAACCGCGTT TATTGAAATG GCGGCGACCA GTGGGCTGGA GCTGGTACCT GCGGAAAAAC GCGATCCACT CGTGACCACT TCACGCGGCA CAGGCGAGTT AATCCTGCAG GCGCTGGAGA GCGGTGCGAC AAACATTATT ATCGGCATTG GCGGCAGCGC TACAAATGAT GGCGGCGCAG GCATGGTACA GGCGCTGGGG GCGAAATTAT GCGACGCCAA CGGCAATGAA ATTGGTTTTG GCGGCGGTAG TCTTAATACT CTGAATGATA TTGATATTTC CGGCCTCAAT CCGCGCTTAA AAGATTGCGT CATTCGCGTC GCTTGTGATG TCACCAATCC GCTGGTGGGC GATAACGGCG CATCGCGCAT CTTTGGCTCA CAAAAGGGAG CCAGTGAAGC GATGATTGTT GAGCTGGACA ATAACCTCTC TCACTATGCC GAGGTCATTA AAAAAGCGCT GCATGTTGAT GTGAAAGATG TCCCCGGCGC AGGAGCTGCG GGCGGTATGG GCGCGGCGCT GATGGCGTTT CTTGGTGCGG AACTGAAAAG TGGTATTGAA ATCGTCACTA CGGCGCTGAA TCTGGAAGAA CATATTCACG ATTGTACGCT GGTGATCACC GGTGAAGGGC GTATTGACAG CCAGAGTATT CACGGCAAGG TACCGATTGG TGTCGCAAAC GTGGCGAAGA AGTACCATAA ACCGGTGATT GGCATTGCGG GTAGCCTGAC CGATGATGTT GGCGTTGTAC ATCAGCATGG CATTGATGCG GTCTTCAGCG TATTGACCAG CATAGGTACG TTGGACGAAG CATTCCGCGG GGCTTATGAC AATATCTGCC GTGCTTCACG TAATATCGCC GCGACACTGG CGATTGGAAT GCGCAACGCG GGGTGA
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Protein sequence | MKIVIAPDSY KESLSASEVA QAIEKGFREI FPDAQYVSVP VADGGEGTVE AMIAATQGSE RHAWVTGPLG EKVNASWGIS GDGKTAFIEM AATSGLELVP AEKRDPLVTT SRGTGELILQ ALESGATNII IGIGGSATND GGAGMVQALG AKLCDANGNE IGFGGGSLNT LNDIDISGLN PRLKDCVIRV ACDVTNPLVG DNGASRIFGS QKGASEAMIV ELDNNLSHYA EVIKKALHVD VKDVPGAGAA GGMGAALMAF LGAELKSGIE IVTTALNLEE HIHDCTLVIT GEGRIDSQSI HGKVPIGVAN VAKKYHKPVI GIAGSLTDDV GVVHQHGIDA VFSVLTSIGT LDEAFRGAYD NICRASRNIA ATLAIGMRNA G
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