| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3190 |
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| Symbol | emrB |
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| ID | 6271197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2978706 |
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| End bp | 2980253 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641727106 |
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| Product | multidrug resistance protein B |
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| Protein accession | YP_001881560 |
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| Protein GI | 187730572 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0313882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAGC AAAAACCGCT GGAAGGCGCG CAACTGGTCA TTATGACGAT TGCGCTGTCA
CTGGCGACAT TCATGCAGGT GCTGGACTCC ACCATTGCTA ACGTGGCGAT CCCCACTATC
GCCGGGAATC TGGGCTCATC GCTCAGCCAG GGAACGTGGG TAATCACTTC TTTCGGGGTG
GCGAATGCCA TCTCGATCCC GCTTACCGGC TGGCTGGCAA AGCGCGTCGG GGAAGTGAAA
CTGTTCCTTT GGTCCACCAT CGCCTTTGCT ATTGCGTCGT GGGCGTGTGG TGTCTCCAGC
AGCCTGAATA TGCTGATCTT CTTCCGTGTG ATTCAGGGGA TTGTCGCTGG GCCGTTGATC
CCACTTTCGC AAAGTCTTTT GCTGAATAAT TACCCGCCAG CCAAACGCTC AATCGCGCTG
GCGTTGTGGT CGATGACGGT GATTGTCGCG CCAATTTGCG GCCCAATCCT CGGCGGTTAT
ATCAGCGATA ATTACCACTG GGGCTGGATA TTCTTCATCA ACGTGCCAAT TGGCGTGGCG
GTGGTGTTGA TGACACTGCA AACCCTGCGC GGACGCGAAA CCCGCACCGA ACGGCGGCGG
ATTGATGCCG TGGGGCTGGC ACTGCTGGTT ATTGGTATCG GTAGCCTGCA GATTATGCTC
GACCGCGGTA AAGAGCTGGA CTGGTTTTCA TCACAGGAAA TTATCATTCT TACCGTGGTG
GCGGTGGTGG CGGTGGTGGC TATCTGCTTC CTGATTGTCT GGGAGCTGAC CGACGATAAC
CCGATAGTCG ATCTGTCGTT GTTTAAGTCG CGCAACTTCA CCATCGGCTG CTTGTGTATC
AGCCTCGCGT ATATGCTCTA CTTCGGCGCG ATTGTTCTGC TGCCGCAGTT GTTGCAGGAG
GTCTACGGTT ACACGGCGAC CTGGGCAGGT TTGGCCTCTG CGCCGGTAGG GATTATTCCG
GTGATCCTGT CGCCGATTAT CGGCCGCTTC GCGCATAAAC TGGATATGCG GCGGCTGGTA
ACCTTCAGCT TTATTATGTA TGTCGTCTGC TTCTACTGGC GTGCCTATAC CTTTGAACCA
GGTATGGATT TTGGCGCGTC GGCCTGGCCG CAGTTTATCC AGGGGGTTGC GGTGGCCTGC
TTCTTTATGC CGCTGACCAC CATTACGCTG TCTGGTTTGC CACCGGAACG ACTGGCGGCG
GCATCGAGCC TCTCTAACTT TACGCGAACG CTGGCGGGGT CTATCGGCAC GTCGATAACC
ACGACCATGT GGACCAACCG CGAGTCGATG CACCATGCGC AGTTGACTGA GTCGGTAAAC
CCGTTCAACC CGAATGCCCA GGCGATGTAC AGTCAACTGG AAGGGCTTGG GATGACGCAA
CAGCAGGCAT CAGGCTGGAT TGCCCAGCAG ATCACTAATC AGGGGCTGAT TATTTCCGCC
AATGAGATCT TCTGGATGTC AGCCGGGATA TTCCTCGTCC TGCTGGGGCT GGTGTGGTTT
GCTAAACCGC CCTTTGGCGC AGGTGGCGGC GGAGGTGGTG CGCACTAA
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| Protein sequence | MQQQKPLEGA QLVIMTIALS LATFMQVLDS TIANVAIPTI AGNLGSSLSQ GTWVITSFGV
ANAISIPLTG WLAKRVGEVK LFLWSTIAFA IASWACGVSS SLNMLIFFRV IQGIVAGPLI
PLSQSLLLNN YPPAKRSIAL ALWSMTVIVA PICGPILGGY ISDNYHWGWI FFINVPIGVA
VVLMTLQTLR GRETRTERRR IDAVGLALLV IGIGSLQIML DRGKELDWFS SQEIIILTVV
AVVAVVAICF LIVWELTDDN PIVDLSLFKS RNFTIGCLCI SLAYMLYFGA IVLLPQLLQE
VYGYTATWAG LASAPVGIIP VILSPIIGRF AHKLDMRRLV TFSFIMYVVC FYWRAYTFEP
GMDFGASAWP QFIQGVAVAC FFMPLTTITL SGLPPERLAA ASSLSNFTRT LAGSIGTSIT
TTMWTNRESM HHAQLTESVN PFNPNAQAMY SQLEGLGMTQ QQASGWIAQQ ITNQGLIISA
NEIFWMSAGI FLVLLGLVWF AKPPFGAGGG GGGAH
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