Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3081 |
Symbol | truC |
ID | 6271600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2876353 |
End bp | 2877135 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727009 |
Product | tRNA pseudouridine synthase C |
Protein accession | YP_001881468 |
Protein GI | 187734142 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.495199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGAAA TACTCTATCA GGATGAATGG CTGGTTGCGG TAAATAAACC CTCCGGCTGG CTGGTTCACC GTAGCTGGCT GGATCGCGAC GAGAAAGTAG TGGTCATGCA AACCGTGCGT GACCAGATAG GACAGCATGT TTTTACTGCT CATCGTCTGG ACCGACCCAC TTCTGGTGTG TTGTTGATGG GATTATCCAG CGAGGCCGGA CGGCTGCTGG CACAACAGTT TGAACAGCAC CAAATCCAGA AACGTTACCA TGCGATTGTG CGCGGATGGT TGATGGAAGA AGCGGTGCTG GATTATCCAC TGGTGGAAGA ACTGGACAAA ATCGCTGATA AATTTGCCCG CGAAGATAAA GGCCCGCAGC CAGCAGTGAC GCATTATCGC GGTCTGGCGA CCGTAGAAAT GCCGGTAGCG ACCGGACGTT ACCCGACCAC GCGCTACGGC CTGGTGGAAC TGGAGCCGAA AACCGGACGC AAACATCAGC TTCGCCGACA TCTTGCCCAT TTGCGTCATC CGATTATTGG CGATAGCAAA CATGGCGATT TACGCCAGAA TCGCAGCGGT GCTGAGCATT TTGGCCTCCA GCGGTTAATG CTACATGCCA GTCAGTTGTC ATTGACGCAT CCTTTTACTG GCGAGCCGCT GACTATTCAC GCGGGCCTGG ACGACACCTG GATGCAGGCG TTATCACAAT TTGGCTGGCG CGGTCTGCTT CCTGAAAATG AAAGGGTTGA GTTCAGTGCG CCATCGGGTC AGGATGGAGA GATAAGTTCC TAA
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Protein sequence | MLEILYQDEW LVAVNKPSGW LVHRSWLDRD EKVVVMQTVR DQIGQHVFTA HRLDRPTSGV LLMGLSSEAG RLLAQQFEQH QIQKRYHAIV RGWLMEEAVL DYPLVEELDK IADKFAREDK GPQPAVTHYR GLATVEMPVA TGRYPTTRYG LVELEPKTGR KHQLRRHLAH LRHPIIGDSK HGDLRQNRSG AEHFGLQRLM LHASQLSLTH PFTGEPLTIH AGLDDTWMQA LSQFGWRGLL PENERVEFSA PSGQDGEISS
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