Gene SbBS512_E2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2974 
Symbol 
ID6269657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2780775 
End bp2781506 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content54% 
IMG OID641726916 
Producthypothetical protein 
Protein accessionYP_001881381 
Protein GI187733414 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00490626 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGC TGATTGTCCC GCAGTGGCCG CTGCCAAAAG GTGTTGCGGC CTGTAGCTCT 
ACCCGTATCG GCGGCGTGAG CTTGCCACCT TACGACTCTC TCAACCTTGG CGCTCATTGT
GGTGATAACC CGGAGCACGT AGAGGAGAAT CGCAAGCAAC TTTTTGCTGC GGGAAATTTG
CCTTCAAAAC CGGTCTGGCT TGAGCAGGTA CACGGCAAAG ATGTGCTTAA GCTCACTGGC
GAACCTTATG CCTCAAAACG GGCGGATGCC TCTTATAGCA ATACGCCCGG CACGGTTTGC
GCAGTGATGA CTGCCGACTG CCTCCCTGTG CTGTTTTGCA ATCGAGCGGG AACGGAAGTC
GCCGCCGTTC ATGCTGGCTG GCGTGGACTG TGCGCAGGCG TGCTGGAAGA GACGGTTTCC
TGTTTTGCTG ATAAACCTGA AAACATTCTC GCCTGGTTAG GGCCGGCAAT TGGTCCACGC
GCGTTCGAAG TGGGGGCGGA GGTTCGCGAG GCGTTTATGG CAGTAGACGC TAAAGCAAGT
GCAGCTTTCA TTCAGCATGG TGATAAGTAT CTGGCGGATA TTTATCAGCT TGCCCGGCAG
CGTCTGGCGA ACGTGGGTGT TGAGCAAATT TTCGGCGGCG ACCGTTGTAC ATATACGGAA
AATGAGACTT TCTTCTCTTA TCGTCGCGAC AAGACCACCG GTCGTATGGC AAGTTTCATT
TGGCTGATAT AA
 
Protein sequence
MSKLIVPQWP LPKGVAACSS TRIGGVSLPP YDSLNLGAHC GDNPEHVEEN RKQLFAAGNL 
PSKPVWLEQV HGKDVLKLTG EPYASKRADA SYSNTPGTVC AVMTADCLPV LFCNRAGTEV
AAVHAGWRGL CAGVLEETVS CFADKPENIL AWLGPAIGPR AFEVGAEVRE AFMAVDAKAS
AAFIQHGDKY LADIYQLARQ RLANVGVEQI FGGDRCTYTE NETFFSYRRD KTTGRMASFI
WLI