Gene SbBS512_E2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2953 
Symbol 
ID6272058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp2759980 
End bp2760678 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content52% 
IMG OID641726897 
ProductDTW domain protein 
Protein accessionYP_001881366 
Protein GI187731535 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0352183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAA ACGCTGTTCT CCAGTTACGC ACCGAGCGTA TTGCGCGCGC AACACGTCCT 
TTTCTTGCCC GCGGTAATCG CGTTCGTCGC TGCCAACGCT GTCTTTTGCC AGAGAAATTA 
TGTCTCTGTT CGACAATTAC CCCAGCACAA GCAAAAAGTC GCTTCTGTTT GCTGATGTTC 
GACACCGAGC CAATGAAGCC CAGTAATACC GGGCGTCTGA TTGCTGATAT TTTGCCTGAT 
ACCGTTGCGT TTCAATGGTC GCGTACCGAA CCCTCGCAGG ATTTGCTGGA TCTGGTACAA 
AACCCGGATT ATCAGCCAAT GGTGGTCTTT CCCGCCTCGT ATGCTGATGA GCAACGGGAA 
GTGATCTTCA CACCACCTGC CGGTAAGCCA CCGCTGTTTA TCATGCTCGA TGGTACCTGG 
CCGGAAGCTC GCAAGATGTT TCGTAAAAGT CCGTATCTGG ATAATCTTCC CGTCATTTCC 
GTCGATCTTT CCCGGCTTTC TGCCTATCGC CTGCGTGAAG CCCAGGCTGA AGGCCAATAT 
TGTACTGCCG AGGTAGCCAT CGCACTGTTA GATATGGCCG GCGATACCGG GGCGGCAGCA 
GGGTTAGGCG AGCATTTTAC CCGCTTTAAA ACACGCTATC TGGCAGGAAA AACGCAACAT 
CTGGGTAGCA TCACAGCAGA ACAGTTAGAA AGCGTTTAA
 
Protein sequence
MTENAVLQLR TERIARATRP FLARGNRVRR CQRCLLPEKL CLCSTITPAQ AKSRFCLLMF 
DTEPMKPSNT GRLIADILPD TVAFQWSRTE PSQDLLDLVQ NPDYQPMVVF PASYADEQRE 
VIFTPPAGKP PLFIMLDGTW PEARKMFRKS PYLDNLPVIS VDLSRLSAYR LREAQAEGQY 
CTAEVAIALL DMAGDTGAAA GLGEHFTRFK TRYLAGKTQH LGSITAEQLE SV