Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2934 |
Symbol | lepA |
ID | 6269042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2740439 |
End bp | 2742238 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641726879 |
Product | GTP-binding protein LepA |
Protein accession | YP_001881348 |
Protein GI | 187731006 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0103463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATA TACGTAACTT TTCGATCATA GCTCACATTG ACCACGGTAA ATCGACGCTG TCTGACCGTA TTATCCAGAT CTGCGGTGGC CTGTCTGACC GTGAAATGGA GGCGCAGGTT CTCGATTCCA TGGATCTTGA GCGTGAGCGT GGCATTACCA TCAAAGCGCA AAGCGTGACG CTGGACTACA AAGCGTCTGA CGGCGAAACC TATCAGCTTA ACTTTATCGA CACCCCGGGC CACGTAGACT TCTCCTATGA AGTTTCCCGT TCGCTGGCTG CCTGTGAAGG TGCATTGCTG GTGGTCGACG CCGGGCAGGG CGTGGAAGCG CAAACCCTGG CAAACTGCTA CACCGCCATG GAAATGGATC TCGAAGTGGT GCCAGTACTG AACAAGATTG ACCTGCCGGC AGCCGATCCT GAACGCGTGG CGGAAGAAAT TGAAGATATC GTCGGCATCG ACGCCACTGA CGCGGTGCGC TGTTCAGCGA AAACCGGCGT TGGCGTGCAG GACGTTCTCG AACGTCTGGT GCGCGACATT CCGCCGCCGG AAGGCGATCC GGAAGGCCCG TTGCAGGCAC TAATTATCGA CTCATGGTTC GACAACTACC TGGGCGTTGT TTCACTTATC CGTATTAAAA ACGGCACCCT GCGTAAGGGC GACAAAGTGA AAGTCATGAG TACCGGGCAG ACCTATAACG CCGACCGTCT GGGCATCTTC ACGCCGAAAC AGGTTGACCG CACTGAACTG AAATGTGGCG AAGTAGGCTG GCTGGTATGT GCGATTAAAG ATATCCACGG CGCTCCAGTC GGCGATACCT TAACGCTGGC GCGTAATCCG GCAGAAAAGG CGCTGCCTGG CTTTAAGAAA GTCAAACCGC AGGTATACGC CGGTCTGTTC CCGGTAAGTT CCGACGACTA TGAAGCCTTC CGTGACGCGC TGGGTAAACT CAGCCTGAAT GATGCCTCAC TGTTCTATGA GCCGGAAAGC TCCAGCGCGC TGGGCTTTGG TTTCCGCTGC GGCTTCCTTG GCCTGCTGCA CATGGAGATC ATCCAGGAAC GTCTGGAACG TGAATACGAT CTGGATCTGA TCACCACTGC GCCGACCGTA GTGTATGAAG TTGAAACCAC GTCAAGGGAA GTTATCTACG TCGACAGCCC ATCCAAGCTG CCTGCGGTAA ATAACATTTA CGAACTGCGC GAGCCGATTG CAGAGTGTCA CATGCTGCTG CCGCAGGCAT ATCTCGGCAA CGTTATTACG CTGTGCGTAG AAAAACGCGG CGTGCAGACC AATATGGTTT ACCACGGTAA TCAGGTGGCG CTGACGTACG AGATCCCGAT GGCGGAAGTG GTGCTCGACT TCTTCGATCG CCTGAAATCT ACCTCGCGTG GTTATGCGTC TCTGGATTAC AACTTCAAAC GCTTCCAGGC GTCCGACATG GTACGTGTAG ACGTATTAAT CAACGGTGAA CGTGTTGATG CGTTGGCGCT GATCACCCAC CGTGATAATT CGCAAAACCG CGGTCGCGAG TTGGTGGAGA AGATGAAAGA TCTGATCCCA CGCCAGCAGT TTGATATCGC CATTCAGGCA GCGATTGGTA CGCACATTAT TGCGCGATCC ACCGTGAAAC AGCTGCGTAA AAACGTACTG GCTAAATGTT ATGGCGGCGA TATCAGCCGT AAGAAAAAGC TGCTGCAGAA GCAGAAAGAA GGTAAGAAAC GCATGAAGCA GATCGGTAAC GTCGAGCTGC CGCAGGAAGC GTTCCTCGCC ATTCTGCACG TCGGCAAAGA CAACAAATAA
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Protein sequence | MKNIRNFSII AHIDHGKSTL SDRIIQICGG LSDREMEAQV LDSMDLERER GITIKAQSVT LDYKASDGET YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAM EMDLEVVPVL NKIDLPAADP ERVAEEIEDI VGIDATDAVR CSAKTGVGVQ DVLERLVRDI PPPEGDPEGP LQALIIDSWF DNYLGVVSLI RIKNGTLRKG DKVKVMSTGQ TYNADRLGIF TPKQVDRTEL KCGEVGWLVC AIKDIHGAPV GDTLTLARNP AEKALPGFKK VKPQVYAGLF PVSSDDYEAF RDALGKLSLN DASLFYEPES SSALGFGFRC GFLGLLHMEI IQERLEREYD LDLITTAPTV VYEVETTSRE VIYVDSPSKL PAVNNIYELR EPIAECHMLL PQAYLGNVIT LCVEKRGVQT NMVYHGNQVA LTYEIPMAEV VLDFFDRLKS TSRGYASLDY NFKRFQASDM VRVDVLINGE RVDALALITH RDNSQNRGRE LVEKMKDLIP RQQFDIAIQA AIGTHIIARS TVKQLRKNVL AKCYGGDISR KKKLLQKQKE GKKRMKQIGN VELPQEAFLA ILHVGKDNK
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