| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2930 |
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| Symbol | recO |
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| ID | 6269515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2736854 |
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| End bp | 2737582 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641726875 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_001881344 |
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| Protein GI | 187733291 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.4363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGGCT GGCAGCGCGC ATTTGTCCTG CATAGTCGCC CGTGGAGCGA AACCAGCCTG
ATGCTGGACG TCTTCACGGA GGAATCGGGT CGCGTGCGTC TGGTTGCCAA AGGCGCACGC
TCTAAACGCT CTACTCTGAA AGGTGCATTA CAGCCTTTCA CCCCTCTCTT GCTACGTTTC
GGCGGGCGTG GCGAAGTCAA AACGCTGCGC AGTGCTGAAG CTGTCTCGCT GGCGCTGCCA
TTAAGCGGTA TCACGCTTTA CAGCGGTCTG TACATCAACG AACTTCTCTC CCGCGTACTG
GAATACGAGA CGCGCTTCTC TGAACTCTTT TTCGATTATT TGCACTGCAT TCAGTCTCTT
GCAGGTGCCA CTGGTACGCC AGAACCCGCG CTGCGCCGCT TTGAACTGGC ACTGCTCGGG
CATCTGGGCT ATGGCGTCAA TTTTACCTAT TGCGCGGGTA GCGGCGAGCC GGTAGATGAC
ACCATGACGT ATCGTTATCG CGAAGAAAAA GGGTTTATCG CAAGCGTCGT TATCGACAAT
AAAACGTTCA CCGGAAGGCA GTTAAAAGCG TTAAACGCGC GGGAATTTCC TGACGCAGAC
ACACTACGCG CCGCGAAACG CTTTACCCGC ATGGCGCTTA AGCCGTATCT TGGCGGTAAA
CCATTAAAGA GCAGGGAACT GTTCCGGCAG TTTATGCCTA AGCGAACGGT GAAAACACAT
TATGAATGA
|
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| Protein sequence | MEGWQRAFVL HSRPWSETSL MLDVFTEESG RVRLVAKGAR SKRSTLKGAL QPFTPLLLRF
GGRGEVKTLR SAEAVSLALP LSGITLYSGL YINELLSRVL EYETRFSELF FDYLHCIQSL
AGATGTPEPA LRRFELALLG HLGYGVNFTY CAGSGEPVDD TMTYRYREEK GFIASVVIDN
KTFTGRQLKA LNAREFPDAD TLRAAKRFTR MALKPYLGGK PLKSRELFRQ FMPKRTVKTH
YE
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