Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2868 |
Symbol | |
ID | 6271219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2665819 |
End bp | 2667282 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641726812 |
Product | peptidase, M48 family |
Protein accession | YP_001881285 |
Protein GI | 187732752 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGGC AGTTGAAAAA AAACCTGGTT GCAACCCTCA TTGCTGCTAT GACCATTGGT CAGGTAGCCC CGGCGTTTGC CGACAACGCA GACACCTTGC CGGATATGGG AACCTCCGCA GGAAGCACGC TTTCCATTGG TCAGGAAATG CAGATGGGCG ACTATTATGT CCGCCAGCTA CGCGGCAGCG CGCCGTTAAT TAATGACCCG CTGTTAACGC AATATATTAA TTCGCTGGGG ATGCGTCTGG TTTCGCATGC CAATTCGGTT AAGACACCGT TTCATTTTTT TCTAATCAAC AACGACGAAA TTAACGCCTT TGCTTTCTTT GGCGGCAACG TGGTGCTGCA CTCTGCCCTG TTCCGTTATT CCGATAACGA AAGTCAACTG GCTTCAGTTA TGGCGCACGA AATCTCCCAC CTCACCCAAC GTCACCTGGC GCGAGCGATG GAAGATCAGC AGCGCAGCGC GCCGCTGACC TGGGTCGGCG CGTTAGGTTC TATTTTACTG GCGATGGCCA GTCCGCAGGC GGGGATGGCG GCGCTGACCG GTACACTGGC GGGAACGCGT CAGGGGATGA TCAGTTTCAC CCAGCAAAAT GAACAGGAAG CGGACCGCAT TGGTATTCAG GTGCTGCAAC GCTCGGGATT CGATCCGCAG GCGATGCCAA CCTTCCTCGA AAAATTACTC GATCAGGCGC GTTACTCCTC GCGCCCGCCG GAAATTTTAT TGACTCACCC GTTGCCGGAA AGTCGTCTGG CAGATGCCCG CAACCGTGCT AATCAGATGC GACCGATGGT GGTGCAGTCG TCGGAAGATT TCTATCTGGC GAAAGCGCGC ACACTGGGGA TGTATAATTC CGGACGTAAC CAGCTCACCA GTGATTTGCT GGATGAATGG GCGAAAGGAA ACGTTCGTCA GCAACGAGCG GCGCAATATG GTCGTGCTTT ACAGGCGATG GAAGCCAATA AATACGACGA GGCGCGTAAA ACGCTGCAAC CGTTACTGGC GGCAGAACCT GGCAACGCAT GGTATCTCGA TCTGGCTACC GATATCGATC TTGGGCAAAA CAAAGCCAAT GAGGCAATCA ATCGCCTGAA AAATGCCCGT GATTTGCGCA CCAATCCGGT GTTGCAGCTC AACCTGGCAA ACGCTTATCT GCAAGGCGGT CAACCACAAG AAGCGGCCAA TATTCTCAAT CGCTACACCT TTAATAATAA AGATGACAGC AACGGCTGGG ATTTACTGGC ACAGGCGGAA GCCGCGCTAA ATAACCGCGA TCAGGAGCTG GCTGCGCGAG CAGAAGGTTA TGCGCTCGCC GGACGACTCG ATCAGGCCAT TTCGCTGTTG AGTAGCGCCA GTTCGCAGGT GAAATTAGGC AGCCTGCAAC AAGCGCGTTA CGATGCGCGC ATCGACCAGT TGCGCCAGCT GCAGGAACGC TTTAAGCCTT ATACCAAGAT GTAA
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Protein sequence | MFRQLKKNLV ATLIAAMTIG QVAPAFADNA DTLPDMGTSA GSTLSIGQEM QMGDYYVRQL RGSAPLINDP LLTQYINSLG MRLVSHANSV KTPFHFFLIN NDEINAFAFF GGNVVLHSAL FRYSDNESQL ASVMAHEISH LTQRHLARAM EDQQRSAPLT WVGALGSILL AMASPQAGMA ALTGTLAGTR QGMISFTQQN EQEADRIGIQ VLQRSGFDPQ AMPTFLEKLL DQARYSSRPP EILLTHPLPE SRLADARNRA NQMRPMVVQS SEDFYLAKAR TLGMYNSGRN QLTSDLLDEW AKGNVRQQRA AQYGRALQAM EANKYDEARK TLQPLLAAEP GNAWYLDLAT DIDLGQNKAN EAINRLKNAR DLRTNPVLQL NLANAYLQGG QPQEAANILN RYTFNNKDDS NGWDLLAQAE AALNNRDQEL AARAEGYALA GRLDQAISLL SSASSQVKLG SLQQARYDAR IDQLRQLQER FKPYTKM
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