Gene SbBS512_E2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2857 
SymbolhyfE 
ID6271621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp2654522 
End bp2655172 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID641726802 
Producthydrogenase 4 membrane subunit 
Protein accessionYP_001881275 
Protein GI187731081 
COG category[C] Energy production and conversion 
COG ID[COG4237] Hydrogenase 4 membrane component (E) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGTT CTATGATCGT AAATAATCTG GCGGGACTGA TGATGCTGAC ATCGCTGTTT 
GTGATTAGCG TCAAAAGCTA TCGCCTGTCA TGCGGATTTT ACGCCTGCCA GTCGCTGGTG 
CTGGTGTCTA TTTTCGCCAC TCTCTCGTGC CTGTTCGCCG CAGAGCAACT GCTGATCTGG 
TCCGCCAGCG CCTTTATCAC CAAAGTGCTG CTGGTACCGT TAATCATGAC TTACGCTGCA 
CGAAATATTC CCCAGAACAT CCCGGAAAAA GCGTTATTCG GTCCGGCAAT GATGGCACTG 
CTCGCGGCGT TAATTGTCCT GCTTTGCGCA TTTGTCGTTC AGCCCGTGAA GCTACCGATG 
GCTACCGGGC TGAAACCGGC GCTGGCGGTA GCGTTAGGTC ATTTTCTGCT TGGCCTGCTG 
TGCATTGTCA GCCAGCGCAA TATCCTGCGG CAAATTTTTG GTTACTGCCT GATGGAAAAC 
GGCTCCCATC TGGTGCTGGC GCTTCTTGCC TGGCGAGCAC CGGAACTGGT GGAAATAGGT 
ATCGCTACCG ACGCCATCTT CGCCGTCATT GTGATGGTGT TACTGGCAAG AAAAATATGG 
CGTACCCACG GCACGCTGGA CGTGAACAAC TTGACCGCGC TGAAGGGATA A
 
Protein sequence
MIGSMIVNNL AGLMMLTSLF VISVKSYRLS CGFYACQSLV LVSIFATLSC LFAAEQLLIW 
SASAFITKVL LVPLIMTYAA RNIPQNIPEK ALFGPAMMAL LAALIVLLCA FVVQPVKLPM 
ATGLKPALAV ALGHFLLGLL CIVSQRNILR QIFGYCLMEN GSHLVLALLA WRAPELVEIG 
IATDAIFAVI VMVLLARKIW RTHGTLDVNN LTALKG