Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2724 |
Symbol | |
ID | 6271409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2525034 |
End bp | 2526374 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641726687 |
Product | long-chain fatty acid outer membrane transporter |
Protein accession | YP_001881167 |
Protein GI | 187731039 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGA AAACCCTGTT TACAAAGTCT GCTCTCGCAG TCGCAGTGGC ACTTATCTCC ACCCAGGCCT GGTCGGCAGG CTTTCAGTTA AACGAATTTT CTTCCTCTGG CCTGGGCCGG GCTTATTCAG GGGAAGGCGC AATTGCCGAT GATGCAGGTA ACGTTAGCCG TAACCCCGCA TTGATTACCA TGTTTGACCG CCCGACATTT TCTGCGGGTG CGGTTTATAT TGACCCGGAT GTGAATATCA GCGGAACGTC TCCGTCTGGT CGTAGCCTGA AAGCCGATAA CATCGCGCCT ACGGCATGGG TTCCGAACAT GCACTTTGTT GCACCGATTA ACGACCAATT TGGTTGGGGC GCTTCTATTA CCTCTAACTA TGGTCTGGCA ACAGAGTTTA ATGATACTTA TGCAGGCGGC TCTGTCGGGG GTACAACTGA CCTTGAAACC ATGAACCTGA ACTTAAGCGG TGCGTATCGC TTAAATAATG CATGGAGCTT TGGTCTTGGT TTCAACGCCG TCTACGCTCG CGCGAAAATT GAACGTTTCG CAGGCGATCT GGGGCAGTTG GTTGCTGGTC AGATTATGCA ATCTCCTGCC GGGCAAACTC CTCAAGGGCA AGCATTGGCA GCTACCGCCA ACGGTATCGA CAGTAATACC AAAATCGCTC ATCTGAACGG TAACCAGTGG GGCTTTGGCT GGAACGCCGG AATCCTGTAT GAACTGGATA AAAATAACCG CTATGCACTG ACCTACCGTT CTGAAGTGAA AATTGACTTC AAAGGTAACT ACAGCAGCGA TCTTAATCGT GCGTTTAATA ACTACGGTTT GCCAATTCCT ACCGCGACAG GTGGCGCAAC GCAATCGGGT TATCTGACGC TGAACCTGCC TGAAATGTGG GAAGTGTCAG GTTATAACCG TGTTGATCCA CAGTGGGCGA TTCACTATAG CCTGGCTTAC ACCAGCTGGA GTCAGTTCCA GCAGCTGAAA GCGACCTCAA CCAGTGGCAA CACGCTGTTC CAGAAACATG AAGGCTTTAA AGATGCTTAC CGCATCGCGT TGGGTACCAC TTATTACTAC GATGATAACT GGACCTTCCG TACCGGTATC GCCTTTGATG ACAGCCCAGT TCCGGCTCAG AATCGTTCTA TCTCCATTCC GGACCAGGAC CGTTTCTGGC TGAGTGCAGG TACGACTTAC GCATTTAATA AAGATGCTTC AGTCGACGTT GGTGTTTCTT ATATGCACGG TCAGAGCGTG AAAATTAACG AAGGCCCATA CCAGTTCGAG TCTGAAGGTA AAGCCTGGCT GTTCGGTACT AACTTTAACT ACGCGTTCTG A
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Protein sequence | MSQKTLFTKS ALAVAVALIS TQAWSAGFQL NEFSSSGLGR AYSGEGAIAD DAGNVSRNPA LITMFDRPTF SAGAVYIDPD VNISGTSPSG RSLKADNIAP TAWVPNMHFV APINDQFGWG ASITSNYGLA TEFNDTYAGG SVGGTTDLET MNLNLSGAYR LNNAWSFGLG FNAVYARAKI ERFAGDLGQL VAGQIMQSPA GQTPQGQALA ATANGIDSNT KIAHLNGNQW GFGWNAGILY ELDKNNRYAL TYRSEVKIDF KGNYSSDLNR AFNNYGLPIP TATGGATQSG YLTLNLPEMW EVSGYNRVDP QWAIHYSLAY TSWSQFQQLK ATSTSGNTLF QKHEGFKDAY RIALGTTYYY DDNWTFRTGI AFDDSPVPAQ NRSISIPDQD RFWLSAGTTY AFNKDASVDV GVSYMHGQSV KINEGPYQFE SEGKAWLFGT NFNYAF
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