Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2662 |
Symbol | nuoC |
ID | 6270757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2462607 |
End bp | 2464409 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641726627 |
Product | bifunctional NADH:ubiquinone oxidoreductase subunit C/D |
Protein accession | YP_001881107 |
Protein GI | 187731573 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0464288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAACA ATATGACCGA CTTAACCGCG CAAGAACCCG CCTGGCAGAC CCGCGATCAT CTTGATGATC CGGTAATTGG CGAACTGCGC AACCGTTTTG GGCCGGATGC CTTTACTGTT CAGGCGACTC GCACCGGGGT TCCCGTTGTG TGGATCAAGC GTGAACAATT ACTGGAAGTT GGCGATTTCT TAAAGAAACT GCCGAAACCT TACGTCATGC TGTTTGACTT ACACGGCATG GACGAACGTC TGCGCACACA CCGCGAAGGG TTACCTGCCG CGGATTTTTC CGTTTTCTAC CATCTGATTT CTATCGATCG TAACCGCGAC ATCATGCTGA AGGTGGCGCT GGCAGAAAAC GACCTGCACG TACCGACCTT CACCAAACTG TTCCCGAACG CTAACTGGTA TGAGCGTGAA ACCTGGGATC TGTTTGGCAT TACTTTCGAC GGTCACCCGA ACCTGCGCCG CATCATGATG CCGCAAACCT GGAAAGGTCA CCCGCTGCGT AAAGATTACC CGGCGCGCGC TACCGAATTC TCGCCGTTTG AGCTGACCAA AGCCAAACAG GATCTGGAGA TGGAAGCCCT GACCTTCAAA CCGGAAGAGT GGGGGATGAA GCGCGGCACC GAAAACGAGG ACTTCATGTT CCTCAACCTC GGTCCGAACC ACCCGTCGGC GCACGGGGCT TTCCGTATCG TTTTACAACT CGACGGCGAA GAGATTGTCG ACTGCGTACC AGACATCGGC TACCACCACC GTGGTGCGGA GAAAATGGGC GAGCGCCAGT CCTGGCACAG CTACATTCCG TATACCGACC GTATTGAATA CCTCGGCGGC TGCGTTAACG AAATGCCTTA CGTGCTGGCG GTAGAGAAAC TGGCCGGGAT CACCGTGCCG GATCGCGTTA ACGTCATTCG CGTTATGCTC TCCGAACTGT TCCGTATCAA CAGCCACCTG CTGTACATCT CGACCTTTAT TCAGGACGTC GGCGCAATGA CGCCCGTGTT CTTCGCCTTT ACCGATCGTC AGAAAATTTA CGATCTGGTG GAAGCGATCA CGGGTTTCCG TATGCACCCG GCGTGGTTCC GTATTGGCGG CGTAGCGCAC GACCTGCCGC GCGGCTGGGA TCGCCTGCTG CGTGAGTTCC TCGACTGGAT GCCGAAACGT CTGGCGTCTT ACGAGAAAGC GGCGCTGCAA AATACCATTC TGAAAGGTCG TTCCCAGGGC GTTGCCGCCT ATGGCGCGAA AGAGGCGCTG GAGTGGGGCA CCACTGGCGC GGGCCTGCGT GCTACCGGGA TCGACTTCGA CGTGCGTAAG GCGCGTCCTT ATTCTGGCTA TGAAAACTTC GACTTTGAAA TCCCGGTTGG TGGTGGTGTT TCTGACTGCT ACACCCGCGT AATGCTGAAA GTGGAAGAGC TGCGCCAGAG TCTGCGCATT CTTGAGCAGT GCCTCAACAA CATGCCGGAA GGCCCGTTCA AAGCGGATCA CCCGCTGACC ACGCCGCCGC CGAAAGAGCG CACGCTGCAA CATATCGAAA CCCTGATCAC CCACTTCCTG CAAGTGTCGT GGGGGCCGGT GATGCCTGCC AATGAATCTT TCCAGATGAT TGAGGCGACC AAGGGGATCA ACAGTTACTA CCTGACCAGC GACGGTAGCA CCATCAGTTA TCGCACTCGT ATCCGCACGC CGAGTTATGC GCATTTGCAG CAAATTCCGG CGGCGATCCG CGGCAGCCTG GTGTCTGACC TGATTGTTTA TCTGGGCAGT ATCGATTTTG TTATGTCAGA TGTGGACCGC TAA
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Protein sequence | MVNNMTDLTA QEPAWQTRDH LDDPVIGELR NRFGPDAFTV QATRTGVPVV WIKREQLLEV GDFLKKLPKP YVMLFDLHGM DERLRTHREG LPAADFSVFY HLISIDRNRD IMLKVALAEN DLHVPTFTKL FPNANWYERE TWDLFGITFD GHPNLRRIMM PQTWKGHPLR KDYPARATEF SPFELTKAKQ DLEMEALTFK PEEWGMKRGT ENEDFMFLNL GPNHPSAHGA FRIVLQLDGE EIVDCVPDIG YHHRGAEKMG ERQSWHSYIP YTDRIEYLGG CVNEMPYVLA VEKLAGITVP DRVNVIRVML SELFRINSHL LYISTFIQDV GAMTPVFFAF TDRQKIYDLV EAITGFRMHP AWFRIGGVAH DLPRGWDRLL REFLDWMPKR LASYEKAALQ NTILKGRSQG VAAYGAKEAL EWGTTGAGLR ATGIDFDVRK ARPYSGYENF DFEIPVGGGV SDCYTRVMLK VEELRQSLRI LEQCLNNMPE GPFKADHPLT TPPPKERTLQ HIETLITHFL QVSWGPVMPA NESFQMIEAT KGINSYYLTS DGSTISYRTR IRTPSYAHLQ QIPAAIRGSL VSDLIVYLGS IDFVMSDVDR
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