Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2660 |
Symbol | nuoF |
ID | 6272463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2460770 |
End bp | 2462107 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641726625 |
Product | NADH dehydrogenase I subunit F |
Protein accession | YP_001881105 |
Protein GI | 187730354 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.142172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA TTATCCGTAC TCCCGAAACG CATCCGCTGA CCTGGCGTCT GCGCGATGAC AAACAGCCAG TGTGGCTGGA CGAATACCGC AGCAAAAACG GTTACGAAGG GGCGCGTAAG GCGCTGACCG GGCTGTCTCC GGACGAAATC GTTAATCAGG TAAAAGACGC TGGTCTGAAA GGGCGCGGCG GAGCGGGCTT TTCGACTGGC CTGAAGTGGA GCCTGATGCC GAAAGACGAA TCCATGAACA TCCGTTACCT GCTGTGTAAC GCCGATGAAA TGGAGCCGGG CACCTATAAA GACCGCCTGT TGATGGAGCA ACTGCCGCAC CTGCTGGTGG AAGGTATGCT CATCTCCGCG TTTGCGCTGA AAGCTTACCG TGGCTACATC TTCCTGCGTG GCGAATATAT CGAAGCGGCA GTAAATCTGC GCCGCGCCAT TGCCGAAGCC ACTGAAGCGG GCTTGCTTGG CAAAAACATT ATGGGAACAG GTTTCGACTT CGAACTGTTC GTCCATACCG GGGCAGGGCG CTACATCTGC GGGGAAGAAA CAGCGTTAAT CAACTCCCTG GAAGGGCGTC GTGCTAACCC ACGCTCGAAA CCCCCCTTCC CGGCAACCTC CGGCGTATGG GGCAAACCGA CCTGTGTCAA CAACGTCGAA ACCCTGTGTA ACGTTCCGGC GATCCTCGCT AACGGCGTGG AGTGGTATCA GAACATCTCG AAAAGTAAAG ATGCTGGCAC CAAGCTGATG GGCTTCTCCG GTCGGGTGAA AAATCCGGGA CTGTGGGAAC TGCCGTTCGG CACCACCGCA CGCGAGATCC TCGAAGATTA CGCCGGTGGT ATGCGTGATG GTCTGAAATT TAAAGCCTGG CAGCCAGGCG GCGCGGGGAC TGACTTCCTG ACCGAAGCGC ACCTTGATCT GCCGATGGAA TTCGAAAGTA TCGGTAAAGC GGGCAGCCGT CTGGGTACGG CGCTGGCGAT GGCGGTTGAC CATGAGATCA ACATGGTGTC GCTGGTGCGT AACCTGGAAG AGTTTTTCGC CCGTGAGTCC TGCGGCTGGT GTACGCCGTG CCGCGACGGT CTGCCGTGGA GCGTGAAAAT TCTGCGTGCG CTGGAGCGTG GCGAAGGCCA GCCGGGCGAT ATCGAAACAC TTGAGCAACT GTGTCGATTC TTAGGCCCGG GTAAAACTTT CTGTGCCCAC GCACCTGGTG CAGTGGAGCC GTTACAGAGC GCCATCAAAT ATTTCCGCGA AGAATTTGAG GCGGGAATCA AACAGCCGTT CAGCAATACC CATTTGATTA ATGGGATTCA GCCGAACCTG CTGAAAGAGC GCTGGTAA
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Protein sequence | MKNIIRTPET HPLTWRLRDD KQPVWLDEYR SKNGYEGARK ALTGLSPDEI VNQVKDAGLK GRGGAGFSTG LKWSLMPKDE SMNIRYLLCN ADEMEPGTYK DRLLMEQLPH LLVEGMLISA FALKAYRGYI FLRGEYIEAA VNLRRAIAEA TEAGLLGKNI MGTGFDFELF VHTGAGRYIC GEETALINSL EGRRANPRSK PPFPATSGVW GKPTCVNNVE TLCNVPAILA NGVEWYQNIS KSKDAGTKLM GFSGRVKNPG LWELPFGTTA REILEDYAGG MRDGLKFKAW QPGGAGTDFL TEAHLDLPME FESIGKAGSR LGTALAMAVD HEINMVSLVR NLEEFFARES CGWCTPCRDG LPWSVKILRA LERGEGQPGD IETLEQLCRF LGPGKTFCAH APGAVEPLQS AIKYFREEFE AGIKQPFSNT HLINGIQPNL LKERW
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