Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2622 |
Symbol | glpT |
ID | 6270488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2423219 |
End bp | 2424577 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641726591 |
Product | sn-glycerol-3-phosphate transporter |
Protein accession | YP_001881071 |
Protein GI | 187733028 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter [TIGR00881] phosphoglycerate transporter family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGAGTA TTTTTAAACC AGCGCCACAC AAAGCGCGCT TACCTGCTGC GGAGATCGAT CCGACTTATC GTCGATTGCG CTGGCAAATT TTCTTGGGGA TATTCTTTGG CTATGCGGCT TACTATTTGG TTCGTAAGAA CTTTGCGCTT GCTATGCCTT ATCTGGTCGA GCAGGGATTC TCTCGCGGTG ATTTAGGTTT CGCGCTTTCG GGGATCTCGA TCGCTTATGG ATTTTCGAAA TTCATAATGG GTTCGGTATC AGATCGCTCG AATCCGCGCG TTTTCCTCCC CGCAGGTTTG ATTCTGGCGG CGGCAGTGAT GTTGTTTATG GGCTTTGTGC CATGGGCGAC GTCGAGCATT GCGGTGATGT TTGTACTTTT GTTCCTCTGC GGTTGGTTCC AGGGGATGGG GTGGCCGCCG TGTGGTCGTA CTATGGTGCA CTGGTGGTCG CAGAAAGAAC GTGGCGGCAT TGTGTCAGTG TGGAACTGTG CGCACAACGT TGGTGGTGGT ATTCCGCCGC TGCTGTTCCT GCTGGGGATG GCCTGGTTCA ATGACTGGCA TGCGGCGCTC TATATGCCTG CTTTCTGCGC CATTCTGGTG GCATTATTCG CCTTTGCGAT GATGCGCGAT ACCCCGCAAT CCTGTGGCTT GCCGCCGATC GAAGAGTACA AAAATGATTA TCCGGACGAC TATAACGAAA AAGCGGAACA GGAGCTGACG GCGAAGCAAA TCTTCATGCA GTACGTACTG CCGAACAAAC TGCTGTGGTA TATCGCCATC GCCAACGTGT TCGTTTATCT GCTGCGTTAC GGCATCCTCG ACTGGTCACC GACTTATCTG AAAGAGGTTA AGCATTTCGC GCTGGATAAA TCCTCCTGGG CCTACTTCCT TTATGAATAT GCAGGTATTC CGGGCACTCT GCTGTGCGGC TGGATGTCGG ATAAAGTCTT CCGTGGCAAC CGTGGGGCAA CCGGCGTTTT CTTTATGACA CTGGTGACCA TCGCGACTAT CGTTTACTGG ATGAATCCGG CAGGTAACCC AACCGTCGAT ATGATTTGTA TGATTGTTAT CGGCTTCCTG ATCTACGGTC CTGTGATGCT GATCGGTCTG CATGCGCTGG AACTGGCACC GAAAAAAGCG GCAGGTACGG CAGCGGGCTT TACCGGGCTG TTTGGTTACC TGGGCGGTTC GGTGGCGGCG AGCGCGATTG TTGGCTACAC CGTGGACTTC TTCGGCTGGG ATGGCGGCTT TATGGTAATG ATTGGCGGCA GCATTCTGGC GGTTATCTTG TTGATTGTTG TGATGATTGG CGAAAAACGT CGCCATGAAC AATTACTACA AAAACGCAAC GGAGGCTAA
|
Protein sequence | MLSIFKPAPH KARLPAAEID PTYRRLRWQI FLGIFFGYAA YYLVRKNFAL AMPYLVEQGF SRGDLGFALS GISIAYGFSK FIMGSVSDRS NPRVFLPAGL ILAAAVMLFM GFVPWATSSI AVMFVLLFLC GWFQGMGWPP CGRTMVHWWS QKERGGIVSV WNCAHNVGGG IPPLLFLLGM AWFNDWHAAL YMPAFCAILV ALFAFAMMRD TPQSCGLPPI EEYKNDYPDD YNEKAEQELT AKQIFMQYVL PNKLLWYIAI ANVFVYLLRY GILDWSPTYL KEVKHFALDK SSWAYFLYEY AGIPGTLLCG WMSDKVFRGN RGATGVFFMT LVTIATIVYW MNPAGNPTVD MICMIVIGFL IYGPVMLIGL HALELAPKKA AGTAAGFTGL FGYLGGSVAA SAIVGYTVDF FGWDGGFMVM IGGSILAVIL LIVVMIGEKR RHEQLLQKRN GG
|
| |