Gene SbBS512_E2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2588 
Symbol 
ID6270875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2389234 
End bp2390286 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content48% 
IMG OID641726564 
Producthypothetical protein 
Protein accessionYP_001881044 
Protein GI187733851 
COG category[S] Function unknown 
COG ID[COG2828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TACCCTGCGT GATGATGCGA GGTGGAACCT CGAGGGGCGC GTTCCTGTTA 
GCGGAACATT TACCCGAAGA TCAAACGCAG CGCGATAAAA TATTGATGGC AATTATGGGT
TCCGGTAACG ATCTGGAAAT TGACGGTATT GGCGGCGGTA ATCCACTGAC CAGTAAAGTC
GCCATTATTA GCCGTTCCAG CGATCCGCGT GCTGATGTCG ATTATCTGTT TGCGCAGGTA
ATCGTTCATG AGCAACGTGT CGATACCACG CCTAACTGTG GCAATATGCT GTCTGGTGTT
GGGGCATTCG CCATTGAAAA TGGTTTGATT GCAGCGACTT CGCCAGTTAC TCGCGTACGT
ATCCGCAACG TCAATACGGG TACGTTCATC GAAGCTGATG TGCAAACGCC AAATGGTGTT
GTCGAGTACG AGGGTAGTGC CAGAATTGAC GGCGTACCGG GTACTGCCGC ACCGGTTGCG
CTCACTTTCC TGAATGCCGC TGGAACCAAA ACCGGAAAAG TTTTCCCGAC TGATAATCAG
ATTGATTATT TTGACGATGT CCCGGTGACC TGTATCGATA TGGCGATGCC AGTCGTCATT
ATTCCGGCTG AATATCTGGG AAAAACAGGT TATGAATTAC CGGCGGAACT GGATGCCGAC
AAAGCATTAT TAGCCTGCAT TGAATCTATC CGTCTACAAG CGGGTAAAGC AATGGGCTTA
GGTGATGTCA GTAATATGGT TATCCCTAAA CCTGTGCTTA TTTCTCCAGC GCAGAAAGGC
GGGGCAATTA ATGTGCGTTA TTTTATGCCG CATTCTTGCC ATCGCGCGCT GGCGATAACC
GGTGCTATTG CTATTTCCAG TAGTTGTGCA TTGGAAGGCA CCGTCACCCG ACAAATCGTC
CCTTCTGTAG GATATGGCAA TATCAATATT GAACACCCCA GTGGTGCGCT CGACGTTCAT
TTAAGTAATG AAGGTCAGGA TGCCACGACG TTACGCGCAT CTGTTATTCG GACAACCAGA
AAAATATTTT CCGGTGAAGT TTATCTTCCC TGA
 
Protein sequence
MKKIPCVMMR GGTSRGAFLL AEHLPEDQTQ RDKILMAIMG SGNDLEIDGI GGGNPLTSKV 
AIISRSSDPR ADVDYLFAQV IVHEQRVDTT PNCGNMLSGV GAFAIENGLI AATSPVTRVR
IRNVNTGTFI EADVQTPNGV VEYEGSARID GVPGTAAPVA LTFLNAAGTK TGKVFPTDNQ
IDYFDDVPVT CIDMAMPVVI IPAEYLGKTG YELPAELDAD KALLACIESI RLQAGKAMGL
GDVSNMVIPK PVLISPAQKG GAINVRYFMP HSCHRALAIT GAIAISSSCA LEGTVTRQIV
PSVGYGNINI EHPSGALDVH LSNEGQDATT LRASVIRTTR KIFSGEVYLP