Gene SbBS512_E2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2564 
Symbol 
ID6272516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2367090 
End bp2368046 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content53% 
IMG OID641726546 
Producthypothetical protein 
Protein accessionYP_001881026 
Protein GI187733913 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.901443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAT CACACCCGCG CTGGCGCTTA GCAAAGAAGA TCCTCACCTG GCTGTTTTTT 
ATCGCGGTGA TTGTGTTGCT GGTGGTCTAC GCCAAAAAAG TGGACTGGGA AGAGGTCTGG
AAGGTCATCC GCGACTACAA TCGCGTTGCG CTGCTTAGTG CGGTCGGGCT GGTGGTCGTC
AGCTATCTGA TTTACGGCTG CTATGACCTG CTCGCCCGCT TTTACTGCGG TCACAAACTG
GCGAAGCGCC AGGTGATGCT GGTGTCGTTT ATCTGCTACG CCTTCAACCT GACGCTCAGT
ACCTGGGTCG GCGGCATTGG TATGCGCTAT CGTTTGTACT CCCGACTAGG GTTACCGGGC
AGCACTATTA CGCGGATTTT CTCGCTCAGT ATTACCACCA ACTGGCTGGG CTATATTTTA
CTGGCAGGGA TTATCTTTAC CGCAGGCGTG GTGGAGTTGC CGGATCACTG GTATGTCGCT
CAAACTACGC TGCGTATTCT CGGCATTGGC TTACTGATGA TTATCGCGGT TTATTTGTGG
TTTTGCGCTT TCGCGAAGCA CCGCCATATG ACCATCAAAG GGCAAAAGCT GGTGCTGCCT
TCATGGAAAT TCGCCCTCAC TCAGATGCTG ATTTCCAGCG TTAACTGGAT GGTAATGGGG
GCGATTATCT GGCTGTTACT TGGTCAAAGC GTGAACTATT TCTTTGTACT GGGCGTGTTA
CTGGTTAGTA GTATTGCTGG CGTCATCGTG CATATTCCGG CGGGGATCGG TGTGCTGGAA
GCGGTGTTTA TCGCACTACT GGCTGGGGAG CATACCTCGA AAGGGAGCAT TATCGCCGCG
CTGCTCGCTT ATCGCGTCCT GTATTACTTT ATCCCGCTGC TGCTGGCGCT GATCTGTTAC
CTGCTACTGG AAAGCCAGGC GAAGAAGCTA CGGGCGAAAA ATGAAGCGGC GATGTGA
 
Protein sequence
MSKSHPRWRL AKKILTWLFF IAVIVLLVVY AKKVDWEEVW KVIRDYNRVA LLSAVGLVVV 
SYLIYGCYDL LARFYCGHKL AKRQVMLVSF ICYAFNLTLS TWVGGIGMRY RLYSRLGLPG
STITRIFSLS ITTNWLGYIL LAGIIFTAGV VELPDHWYVA QTTLRILGIG LLMIIAVYLW
FCAFAKHRHM TIKGQKLVLP SWKFALTQML ISSVNWMVMG AIIWLLLGQS VNYFFVLGVL
LVSSIAGVIV HIPAGIGVLE AVFIALLAGE HTSKGSIIAA LLAYRVLYYF IPLLLALICY
LLLESQAKKL RAKNEAAM