Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2564 |
Symbol | |
ID | 6272516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2367090 |
End bp | 2368046 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641726546 |
Product | hypothetical protein |
Protein accession | YP_001881026 |
Protein GI | 187733913 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.901443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAT CACACCCGCG CTGGCGCTTA GCAAAGAAGA TCCTCACCTG GCTGTTTTTT ATCGCGGTGA TTGTGTTGCT GGTGGTCTAC GCCAAAAAAG TGGACTGGGA AGAGGTCTGG AAGGTCATCC GCGACTACAA TCGCGTTGCG CTGCTTAGTG CGGTCGGGCT GGTGGTCGTC AGCTATCTGA TTTACGGCTG CTATGACCTG CTCGCCCGCT TTTACTGCGG TCACAAACTG GCGAAGCGCC AGGTGATGCT GGTGTCGTTT ATCTGCTACG CCTTCAACCT GACGCTCAGT ACCTGGGTCG GCGGCATTGG TATGCGCTAT CGTTTGTACT CCCGACTAGG GTTACCGGGC AGCACTATTA CGCGGATTTT CTCGCTCAGT ATTACCACCA ACTGGCTGGG CTATATTTTA CTGGCAGGGA TTATCTTTAC CGCAGGCGTG GTGGAGTTGC CGGATCACTG GTATGTCGCT CAAACTACGC TGCGTATTCT CGGCATTGGC TTACTGATGA TTATCGCGGT TTATTTGTGG TTTTGCGCTT TCGCGAAGCA CCGCCATATG ACCATCAAAG GGCAAAAGCT GGTGCTGCCT TCATGGAAAT TCGCCCTCAC TCAGATGCTG ATTTCCAGCG TTAACTGGAT GGTAATGGGG GCGATTATCT GGCTGTTACT TGGTCAAAGC GTGAACTATT TCTTTGTACT GGGCGTGTTA CTGGTTAGTA GTATTGCTGG CGTCATCGTG CATATTCCGG CGGGGATCGG TGTGCTGGAA GCGGTGTTTA TCGCACTACT GGCTGGGGAG CATACCTCGA AAGGGAGCAT TATCGCCGCG CTGCTCGCTT ATCGCGTCCT GTATTACTTT ATCCCGCTGC TGCTGGCGCT GATCTGTTAC CTGCTACTGG AAAGCCAGGC GAAGAAGCTA CGGGCGAAAA ATGAAGCGGC GATGTGA
|
Protein sequence | MSKSHPRWRL AKKILTWLFF IAVIVLLVVY AKKVDWEEVW KVIRDYNRVA LLSAVGLVVV SYLIYGCYDL LARFYCGHKL AKRQVMLVSF ICYAFNLTLS TWVGGIGMRY RLYSRLGLPG STITRIFSLS ITTNWLGYIL LAGIIFTAGV VELPDHWYVA QTTLRILGIG LLMIIAVYLW FCAFAKHRHM TIKGQKLVLP SWKFALTQML ISSVNWMVMG AIIWLLLGQS VNYFFVLGVL LVSSIAGVIV HIPAGIGVLE AVFIALLAGE HTSKGSIIAA LLAYRVLYYF IPLLLALICY LLLESQAKKL RAKNEAAM
|
| |