| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2562 |
|---|
| Symbol | |
|---|
| ID | 6269373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 2365091 |
|---|
| End bp | 2365852 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641726544 |
|---|
| Product | endonuclease/exonuclease/phosphatase family protein |
|---|
| Protein accession | YP_001881024 |
|---|
| Protein GI | 187732981 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATC AAACACAACA ATTTTCGTTC AAGGTGCTCA CCATCAACAT TCAAAAAGGT
TTTACCGCGT TTAACCGACG CTTCATTTTG CCGGAACTTC GCGACGCGGT GCGTACCGTC
AGCGCCGATA TTGTTTGCCT GCAGGAAGTG ATGGGCGCGC ACGAAGTTCA TCCGCTGCAT
GTGGAAAACT GGCCCGATAC CTCGCACTAC GAGTTTCTCG CCGACACTAT GTGCCGCGAT
TTTGCCTACG GTCGCAATGC CGTATACCCG GAAGGGCATC ACGGCAACGC CGTACTGTCG
CGTTATCCCA TTGAACATTA TGAGAATCGC GATGTTTCGG TCGATGGTGC GGAAAAGCGC
GGCGTGCTCT ACTGCCGCAT TGTGCCGCCG ATGACCGGAA AAGCGATTCA TGTGATGTGC
GTACATCTGG GCCTGCGTGA GGCGCACCGT CAGGCGCAGC TTGCGATGCT CGCCGAATGG
GTGAATGAGC TACCGGACGG CGAACCGGTA TTGGTGGCGG GTGATTTCAA TGACTGGCGG
CAAAAAGCTA ATCATCCGTT AAAAGTGCAG GCCGGACTGG ATGAGATTTT TACCCGCGCC
CACGGACGCC CAGCGCGCAC GTTTCCGGTG CAATTTCCTC TACTACGACT GGACAGGATC
TACGTCAAAA ATGCCAGCGC CAGCGCGCCA ACCGCGTTGC CGCTGCGGAC ATGGCGACAC
CTTTCTGATC ATGCCCCTTT AAGTGCGGAG ATTCATTTAT GA
|
|---|
| Protein sequence | MPDQTQQFSF KVLTINIQKG FTAFNRRFIL PELRDAVRTV SADIVCLQEV MGAHEVHPLH
VENWPDTSHY EFLADTMCRD FAYGRNAVYP EGHHGNAVLS RYPIEHYENR DVSVDGAEKR
GVLYCRIVPP MTGKAIHVMC VHLGLREAHR QAQLAMLAEW VNELPDGEPV LVAGDFNDWR
QKANHPLKVQ AGLDEIFTRA HGRPARTFPV QFPLLRLDRI YVKNASASAP TALPLRTWRH
LSDHAPLSAE IHL
|
|---|
| |