Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2450 |
Symbol | macB |
ID | 6271855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2251450 |
End bp | 2253396 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641726442 |
Product | macrolide transporter ATP-binding /permease protein |
Protein accession | YP_001880923 |
Protein GI | 187733708 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0569677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCTT TGCTCGAATT AAAGGATATT CGTCGCAGCT ATCCTGCCGG TGATGAGCAG GTTGAGGTGC TGAAGGGCAT CACCCTCGAT ATTTATGCCG GTGAGATGGT AGCGATTGTT GGCGCTTCAG GTTCCGGTAA ATCGACCCTG ATGAATATTC TCGGCTGTCT GGATAAGGCC ACCAGCGGCA CCTATCGCGT CGCCGGTCAG GATGTTGCCA CACTGGACGC CGATGCGCTG GCGCAACTGC GCCGCGAGCA TTTCGGCTTT ATTTTCCAGC GTTACCATTT ACTTTCGCAT TTAACCGCCG AGCAGAACGT TGAAGTACCC GCCGTCTATG CCGGTCTTGA GCGGAAACAG CGGCTGCTTC GCGCCCAGGA GTTACTGCAA CGACTGGGGC TGGAAGACCG TACAGAGTAT TATCCGGCAC AGCTTTCGGG TGGTCAGCAA CAGCGCGTCA GCATCGCGCG GGCATTGATG AACGGCGGTC AGGTAATTCT TGCCGATGAA CCAACCGGCG CACTGGACAG CCATTCTGGC GAAGAGGTGA TGGCGATCCT GCATCAGCTG CGCGATCGCG GGCATACGGT GATTATCGTC ACCCACGATC CGCAGGTCGC TGCTCAGGCC GAGCGGGTGA TCGAAATTCG CGACGGCGAA ATTGTGCGCA ATCCTCCCGC CATTGAAAAA GTGAATGTTG CTGGCGGGAC GGAGCCTGTT GTCAACACGG TGTCTGGCTG GCGGCAGTTT GTCAGCGGTT TTAACGAGGC GCTGACGATG GCATGGCGGG CGCTGGCAGC GAATAAAATG CGTACTTTAC TGACCATGCT GGGGATTATT ATCGGTATTG CGTCGGTGGT TTCCATTGTC GTGGTGGGTG ACGCCGCCAA ACAAATGGTG CTGGCGGATA TTCGTTCTAT TGGTACGAAT ACTATTGATG TCTATCCCGG GAAAGATTTT GGCGATGACG ATCCGCAATA TCAGCAGGCG CTGAAGTACG ACGACTTAAT CGCCATCCAA AAACAACCGT GGGTCGCCTC AGCCACACCT GCCGTCTCGC AAAACCTGCG CCTGCGTTAT AACAATGTTG ATGTTGCTGC CAGTGCCAAT GGCGTGAGCG GCGATTATTT TAATGTCTAT GGCATGACCT TCAGTGAAGG AAACACCTTT AATCAGGAGC AGCTGAACGG TCGTGCGCAG GTCGTGGTTC TCGACAGTAA TACTCGCCGC CAGCTTTTCC CCCATAAAGC AGATGTGGTT GGCGAGGTGA TTCTGGTCGG CAATATGCCC GCCAGAGTCA TTGGTGTGGC GGAAGAAAAA CAGTCGATGT TTGGTAGCAG TAAAGTGCTG CGTGTCTGGC TACCTTACAG CACGATGTCC GGGCGAGTTA TGGGCCAGTC GTGGCTGAAC TCCATTACTG TCAGGGTAAA AGAAGGATTT GACAGCGCCG AGGCGGAACA GCAACTCACG CGTTTACTTT CACTGCGCCA CGGAAAGAAG GATTTCTTTA CCTGGAACAT GGACGGCGTC TTGAAAACTG TTGAAAAGAC CACACGTACT TTACAACTGT TTCTGACGCT GGTGGCGGTG ATTTCGCTGG TGGTGGGCGG TATTGGTGTA ATGAATATTA TGCTGGTGTC AGTGACCGAG CGGACGCGGG AAATTGGCAT TCGCATGGCT GTAGGTGCGC GAGCAAGCGA TGTTTTGCAA CAGTTCCTGA TCGAAGCCGT ACTGGTTTGC CTGGTCGGTG GCGCGTTGGG AATAACGCTG TCACTGTTAA TTGCTTTCAC CTTGCAGCTT TTCTTACCCG GCTGGGAGAT TGGTTTTTCA CCGTTGGCAC TGCTGCTGGC GTTTCTCTGC TCGACGGCCA CCGGGATTTT ATTTGGATGG TTACCCGCAC GAAATGCGGC ACGACTGGAT CCAGTAGATG CTCTGGCACG AGAGTAA
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Protein sequence | MTPLLELKDI RRSYPAGDEQ VEVLKGITLD IYAGEMVAIV GASGSGKSTL MNILGCLDKA TSGTYRVAGQ DVATLDADAL AQLRREHFGF IFQRYHLLSH LTAEQNVEVP AVYAGLERKQ RLLRAQELLQ RLGLEDRTEY YPAQLSGGQQ QRVSIARALM NGGQVILADE PTGALDSHSG EEVMAILHQL RDRGHTVIIV THDPQVAAQA ERVIEIRDGE IVRNPPAIEK VNVAGGTEPV VNTVSGWRQF VSGFNEALTM AWRALAANKM RTLLTMLGII IGIASVVSIV VVGDAAKQMV LADIRSIGTN TIDVYPGKDF GDDDPQYQQA LKYDDLIAIQ KQPWVASATP AVSQNLRLRY NNVDVAASAN GVSGDYFNVY GMTFSEGNTF NQEQLNGRAQ VVVLDSNTRR QLFPHKADVV GEVILVGNMP ARVIGVAEEK QSMFGSSKVL RVWLPYSTMS GRVMGQSWLN SITVRVKEGF DSAEAEQQLT RLLSLRHGKK DFFTWNMDGV LKTVEKTTRT LQLFLTLVAV ISLVVGGIGV MNIMLVSVTE RTREIGIRMA VGARASDVLQ QFLIEAVLVC LVGGALGITL SLLIAFTLQL FLPGWEIGFS PLALLLAFLC STATGILFGW LPARNAARLD PVDALARE
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