Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2436 |
Symbol | |
ID | 6270261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2234467 |
End bp | 2235810 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641726428 |
Product | recombination factor protein RarA |
Protein accession | YP_001880910 |
Protein GI | 187733902 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.203785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAATC TGTCGCTCGA TTTTTCGGAT AATACTTTTC AACCTCTGGC CGCGCGTATG CGGCCAGAAA ATTTAGCACA GTATATCGGC CAGCAACATT TGCTGGCTGC GGGGAAGCCG TTGCCGCGCG CTATCGAAGC CGGGCATCTG CATTCTATGA TCCTCTGGGG GCCACCGGGT ACCGGCAAAA CAACTCTCGC TGAAGTGATT GCCCGCTATG CGAACGCTGA TGTGGAACGT ATTTCTGCCG TCACCTCTGG CGTGAAAGAG ATTCGCGAGG CGATCGAGCG CGCCCGGCAA AACCGCAATG CAGGTCGCCG CACTATTCTT TTTGTTGACG AAGTTCACCG TTTCAACAAA AGCCAGCAGG ATGCATTTCT GCCACATATT GAAGACGGCA CCATCACTTT TATTGGCGCA ACCACTGAAA ACCCGTCGTT TGAGCTTAAT TCGGCACTGC TTTCCCGTGC CCGTGTCTAT CTGTTGAAAT CCCTGAGTAC AGAGGATATT GAGCAAGTAC TAACTCAGGC GATGGAAGAC AAAACCCGTG GCTATGGTGG TCAGGATATT GTTCTGCCAG ATGAAACACG ACGCGCCATT GCTGAACTGG TGAATGGCGA CGCGCGCCGG GCGTTAAATA CGCTGGAAAT GATGGCGGAT ATGGCCGAAG TCGATGATAG CGGTAAGCGG GTCCTGAAGC CTGAATTACT GACCGAAATC GCAGGTGAAC GTAGTGCCCG CTTTGATAAC AAAGGTGATC GCTTTTACGA TCTCATTTCC GCACTGCATA AATCGGTACG TGGTAGCGCA CCCGATGCGG CGCTGTACTG GTATGCGCGA ATTATTACTG CCGGTGGCGA TCCGTTATAT GTTGCGCGTC GCTGTCTGGC GATTGCGTCT GAAGATGTGG GTAATGCTGA TCCACGAGCG ATGCAGGTGG CAATTGCAGC CTGGGATTGC TTTACTCGCG TTGGCCCGGC GGAAGGTGAA CGCGCCATTG CTCAGGCGAT TGTTTACCTG GCCTGCGCGC CAAAAAGCAA CGCTGTCTAC ACTGCGTTTA AAGCTGCGCT GGCGGATGTT CGCGAACGTC CGGATTATGA CGTGCCGGTT CATTTGCGTA ATGCGCCGAC GAAATTAATG AAGGAAATGG GCTACGGGCA GGAATATCGT TACGCTCATG ATGAAGCAAA CGCTTATGCT GCCGGTGAGG TTTACTTCCC GCGGGAAATA GCACAAACAC GCTATTATTT CCCGACAAAC AGGGGCCTTG AAGGCAAGAT TGGCGAAAAG CTCGCCTGGC TGGCTGAACA GGATCAAAAT AGCCCCATAA AACGCTACCG TTAA
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Protein sequence | MSNLSLDFSD NTFQPLAARM RPENLAQYIG QQHLLAAGKP LPRAIEAGHL HSMILWGPPG TGKTTLAEVI ARYANADVER ISAVTSGVKE IREAIERARQ NRNAGRRTIL FVDEVHRFNK SQQDAFLPHI EDGTITFIGA TTENPSFELN SALLSRARVY LLKSLSTEDI EQVLTQAMED KTRGYGGQDI VLPDETRRAI AELVNGDARR ALNTLEMMAD MAEVDDSGKR VLKPELLTEI AGERSARFDN KGDRFYDLIS ALHKSVRGSA PDAALYWYAR IITAGGDPLY VARRCLAIAS EDVGNADPRA MQVAIAAWDC FTRVGPAEGE RAIAQAIVYL ACAPKSNAVY TAFKAALADV RERPDYDVPV HLRNAPTKLM KEMGYGQEYR YAHDEANAYA AGEVYFPREI AQTRYYFPTN RGLEGKIGEK LAWLAEQDQN SPIKRYR
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