Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2387 |
Symbol | pncB |
ID | 6272878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2178931 |
End bp | 2180133 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641726386 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_001880868 |
Protein GI | 187733305 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0828745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAT TCGCTTCTCC TGTTCTGCAC TCGTTGCTGG ATACAGATGC TTATAAGTTG CATATGCAGC AAGCCGTGTT TCATCACTAT TACGATGTGC ATGTCGCGGC GGAGTTTCGT TGCCGAGGTG ACGATCTGCT GGGTATTTAT GCCGATGCTA TTCGTGAACA GATTCAGGCG ATGCAGCACC TGCGCCTGCA GGATGATGAA TATCAGTGGC TCTCTGCCCT GCCTTTCTTT AAGGCCGACT ATCTTAACTG GTTACGCGAA TTCCGCTTTA ACCCGGAACA AGTCACCGTG TCCAACGATA ATGGCAAGCT GGATATTCGC TTAAGCGGTC CGTGGCGTGA AGTCATCCTC TGGGAAGTTC CTTTGCTGGC GGTTATCAGT GAAATGGTAC ATCGCTATCG CTCACCGCAG GCCGACGTTG CGCAAGCCCT CGACACGCTG GAAAGCAAAT TAGTCGACTT CTCGGCGTTA ACCGCCGGTC TTGATATGTC GCGCTTCCAT CTGATGGATT TTGGCACCCG TCGCCGTTTT TCTCGCGAAG TACAAGAAAC CATCGTTAAG CGTCTGCAAC AGGAATCCTG GTTCGTGGGC ACCAGCAACT ACGATCTGGC GCGTCGGCTT TCCCTCACGC CGATGGGAAC ACAGGCGCAC GAATGGTTCC AGGCACATCA GCAAATCAGC CCGGACCTAG CCAACAGCCA GCGAGCTGCA CTTGCTGCCT GGCTGGAAGA ATATCCCGAC CAACTTGGCA TTGCATTAAC CGACTGCATC ACTATGGATG CTTTCCTGCG TGATTTCGGT GTCGAGTTCG CCAGTCGGTA TCAGGGCCTG CGTCATGACT CTGGCGACCC GGTTGAATGG GGTGAAAAAG CCATTGCACA TTATAAAAAG CTGGGAATTG ATCCACAGAG TAAAACGCTG GTTTTCTCTG ACAATCTGGA TTTACGCAAA GCGGTTGAGC TATACCGCCA CTTCTCTTCC CGCGTGCAAT TAAGTTTTGG TATTGGGACT CGCCTGACCT GCGATATCCC CCAGGTAAAA CCCCTGAATA TTGTGATTAA GTTGGTAGAG TGTAACGGTA AACCGGTGGC GAAACTTTCT GACAGCCCTG GCAAAACTAT CTGCCATGAT AAAGCGTTTG TTCGGGCGCT GCGCAAAGCG TTCGACCTTC CGCATATTAA AAAAGCCAGT TAA
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Protein sequence | MTQFASPVLH SLLDTDAYKL HMQQAVFHHY YDVHVAAEFR CRGDDLLGIY ADAIREQIQA MQHLRLQDDE YQWLSALPFF KADYLNWLRE FRFNPEQVTV SNDNGKLDIR LSGPWREVIL WEVPLLAVIS EMVHRYRSPQ ADVAQALDTL ESKLVDFSAL TAGLDMSRFH LMDFGTRRRF SREVQETIVK RLQQESWFVG TSNYDLARRL SLTPMGTQAH EWFQAHQQIS PDLANSQRAA LAAWLEEYPD QLGIALTDCI TMDAFLRDFG VEFASRYQGL RHDSGDPVEW GEKAIAHYKK LGIDPQSKTL VFSDNLDLRK AVELYRHFSS RVQLSFGIGT RLTCDIPQVK PLNIVIKLVE CNGKPVAKLS DSPGKTICHD KAFVRALRKA FDLPHIKKAS
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