Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2369 |
Symbol | rlmL |
ID | 6270313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2159341 |
End bp | 2161449 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641726373 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_001880855 |
Protein GI | 187734195 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0183103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCTC TGTTTGCCAG TACGGCCCGT GGGCTGGAAG AGCTGTTAAA AACTGAACTG GAAAACCTGG GGGCCGTTGA ATGCCAGGTG GTTCAGGGTG GGGTCCATTT CAAGGGCGAC ACACGGCTTG TTTACCAGAG CCTGATGTGG AGCCGCCTGG CCTCGCGTAT TATGTTGCCG CTGGGCGAGT GTAAGGTTTA CAGCGATTTA GACCTCTATC TCGGTGTTCA GGCGATCAAC TGGACAGAGA TGTTTAATCC TGGCGCGACC TTCGCTGTCC ACTTCAGTGG TTTGAATGAC ACCATCCGCA ACAGTCAGTA CGGCGCGATG AAAGTGAAAG ACGCGATCGT CGATGCTTTC ACGCGGAAAA ATCTGCCGCG TCCAAATGTT GATCGCGATG CGCCGGATAT CCGCGTTAAC GTCTGGCTGC ATAAAGAAAC CGCCAGTATC GCTCTTGATC TGAGTGGTGA TGGTTTACAT CTGCGTGGCT ATCGCGATCG TGCTGGTATT GCGCCGATCA AAGAAACCCT GGCAGCCGCT ATTGTGATGC GATCCGGCTG GCAGCCTGGA ACACCGCTGC TCGATCCGAT GTGTGGTTCC GGTACGTTGC TGATTGAAGC GGCGATGCTG GCGACCGATC GCGCACCCGG CTTGCACCGT GGGCGTTGGG GCTTTAGCGG CTGGGCGCAG CATGATGAAG CTATCTGGCA GGAAGTGAAA GCGGAAGCGC AAACTCGCGC CCGTAAAGGC CTGGCTGAGT ATAGCTCTCA TTTTTACGGT TCGGACAGCG ACGCACGGGT GATTCAACGT GCACGCACTA ACGCCCGTCT TGCGGGGATT GCTGAACTGA TCACCTTTGA GGTGAAAGAT GTCGCGCAAC TGACCAATCC GCTGCTGAAA GGGCCGTACG GCACAGTGTT GAGCAACCCG CCATACGGGG AACGTCTGGA CAGCGAACCG GCGCTGATTG CGCTGCATAG CCTGCTGGGT CGGATCATGA AAAACCAGTT TGGTGGCTGG AATCTCTCTT TGTTTAGTGC CTCGCCGGAT CTGCTAAGCT GCTTGCAGCT GCGTGCAGAC AAACAGTACA AGGCGAAAAA CGGCCCGCTG GACTGCGTAC AGAAAAATTA CCACGTTGCC GAAAGCACTC CAGACAGCAA ACCGGCGATG GTAGCGGAAG ACTACGCCAA CCGCCTGCGT AAGAACCTCA AAAAATTCGA GAAGTGGGCT CGCCAGGAAG GAATTGAATG TTACCGCCTG TATGACGCCG ATCTGCCGGA ATATAACGTT GCCGTTGACC GTTATTCCGA CTGGGTGGTG GTGCAGGAGT ATGCACCGCC AAAAACTATT GATGCTCACA AAGCGCGTCA GCGTCTGTTC GATATTATCG CTGCAACCAT TTCGGTACTG GGGATTGCGC CAAACAAACT GGTGCTGAAA ACCCGTGAAC GCCAGAAGGG CAAAAACCAG TACCAGAAAC TGGGCGAGAA GGGCGAGTTT CTTGAAGTTA CCGAATATAA CGCTCACTTG TGGGTGAACC TGACGGATTA TCTCGATACT GGTCTGTTCC TCGATCACCG TATCGCCCGC CGTATGCTCG GTCAGATGAG CAAAGGCAAA GATTTCCTCA ACCTGTTCTC TTATACCGGT AGCGCCACCG TGCATGCGGG ATTAGGCGGC GCGCGCAGCA CCACCACCGT GGATATGTCG CGTACTTATC TGGAGTGGGC AGAACGCAAC CTGCGTCTGA ATGGCCTAAC CGGGCGTGCG CATCGCCTGA TTCAGGCCGA TTGCCTGGCG TGGCTGCGTG AGGCAAATGA ACAGTTTGAT CTGATCTTTA TCGATCCGCC AACCTTCTCT AACTCAAAAC GAATGGAAGA TGCGTTTGAT GTTCAGCGCG ATCATCTGGC GCTGATGAAA GATTTGAAAC GTCTGCTGCG TGCAGGTGGG ACGATCATGT TCTCGAACAA CAAACGTGGC TTCCGTATGG ATCTCGACGG CCTGGCAAAA CTGGGACTGA AAGCACAAGA AATTACGCAA AAAACGCTCT CCCAGGATTT CGCCCGTAAC CGCCAGATCC ACAACTGCTG GCTGATTACC GCAGCCTGA
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Protein sequence | MNSLFASTAR GLEELLKTEL ENLGAVECQV VQGGVHFKGD TRLVYQSLMW SRLASRIMLP LGECKVYSDL DLYLGVQAIN WTEMFNPGAT FAVHFSGLND TIRNSQYGAM KVKDAIVDAF TRKNLPRPNV DRDAPDIRVN VWLHKETASI ALDLSGDGLH LRGYRDRAGI APIKETLAAA IVMRSGWQPG TPLLDPMCGS GTLLIEAAML ATDRAPGLHR GRWGFSGWAQ HDEAIWQEVK AEAQTRARKG LAEYSSHFYG SDSDARVIQR ARTNARLAGI AELITFEVKD VAQLTNPLLK GPYGTVLSNP PYGERLDSEP ALIALHSLLG RIMKNQFGGW NLSLFSASPD LLSCLQLRAD KQYKAKNGPL DCVQKNYHVA ESTPDSKPAM VAEDYANRLR KNLKKFEKWA RQEGIECYRL YDADLPEYNV AVDRYSDWVV VQEYAPPKTI DAHKARQRLF DIIAATISVL GIAPNKLVLK TRERQKGKNQ YQKLGEKGEF LEVTEYNAHL WVNLTDYLDT GLFLDHRIAR RMLGQMSKGK DFLNLFSYTG SATVHAGLGG ARSTTTVDMS RTYLEWAERN LRLNGLTGRA HRLIQADCLA WLREANEQFD LIFIDPPTFS NSKRMEDAFD VQRDHLALMK DLKRLLRAGG TIMFSNNKRG FRMDLDGLAK LGLKAQEITQ KTLSQDFARN RQIHNCWLIT AA
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