| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2368 |
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| Symbol | uup |
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| ID | 6270969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2157422 |
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| End bp | 2159329 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641726372 |
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| Product | ABC transporter ATPase component |
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| Protein accession | YP_001880854 |
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| Protein GI | 187730429 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.561386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTAA TCAGTATGCA TGGCGCATGG CTGTCGTTCA GCGACGCGCC GCTTCTCGAT
AACGCAGAAC TGCATATCGA AGATAACGAA CGTGTTTGTC TGGTGGGCCG CAACGGCGCG
GGCAAATCGA CGTTAATGAA AATCCTCAAC CGTGAACAAG GGCTGGATGA CGGTCGCATT
ATTTACGAGC AAGATTTAAT TGTAGCTCGT CTGCAACAGG ATCCGCCGCG TAACGTTGAG
GGTAGCGTTT ATGATTTCGT TGCCGAAGGC ATTGAAGAAC AAGCGGAATA TCTGAAACGC
TATCACGATA TTTCGCGCCT GGTGATGAAC GACCCGAGCG AGAAAAATCT CAACGAACTG
GCGAAGGTTC AGGAACAGTT GGATCACCAC AACCTGTGGC AGCTGGAAAA CCGCATCAAC
GAAGTGCTGG CGCAACTGGG GTTAGATCCT AATGTTGCGC TGTCGTCGCT TTCCGGCGGC
TGGTTGCGTA AAGCGGCATT AGGACGCGCG CTGGTGAGTA ATCCGCGCGT GCTGTTGCTT
GATGAACCGA CAAACCACCT GGATATTGAA ACCATCGACT GGCTGGAAGG GTTCCTTAAA
ACCTTCAATG GGACGATTAT TTTCATCTCC CACGACCGTT CGTTTATCCG CAATATGGCG
ACGCGCATTG TTGATCTCGA TCGCGGCAAG CTGGTGACCT ATCCAGGGAA TTACGACCAG
TACCTGCTTG AAAAAGAAGA AGCCCTGCGC GTGGAAGAAC TACAAAATGC CGAGTTCGAT
CGCAAACTGG CGCAGGAAGA GGTGTGGATC CGCCAGGGGA TCAAAGCACG CCGTACCCGT
AATGAAGGCC GCGTACGCGC CCTGAAAGCA ATGCGTCGCG AGCGTGGTGA ACGTCGCGAA
GTGATGGGTA CCGCAAAGAT GCAGGTGGAA GAGGCCAGCC GCTCCGGTAA GATCGTTTTC
GAAATGGAAG ACGTTTGCTA CCAGGTTGAC GGTAAGCAAC TGGTGAAAGA TTTTTCGGCC
CAGGTTCTAC GTGGCGACAA AATTGTCCTG ATTGGTCCGA ATGGGTGCGG CAAAACCACG
CTGCTGAAAC TGATGCTCGG TCAGCTTCAA GCGGACAGCG GGCGTATTCA CGTTGGCACC
AAACTGGAAG TGGCTTATTT CGATCAGCAC CGCGCGGAAC TGGATCCCGA TAAAACGGTG
ATGGATAACA TTGCCGAAGG TAAGCAAGAG GTGATGGTTA ACGGCAAGCC ACGCCACGTA
TTGGGCTATT TGCAGGACTT TCTGTTCCAT CCGAAACGGG CGATGACGCC GGTACGTGCG
CTTTCTGGCG GTGAGCGGAA CCGCTTGCTG CTGGCGCGTT TGTTCCTCAA ACCAAGCAAC
TTATTGATTC TTGACGAACC GACCAACGAT CTTGATGTCG AAACGCTGGA ACTGCTGGAA
GAACTGATCG ACAGCTATCA GGGCACGGTA TTGCTGGTTA GCCACGATCG TCAGTTTGTC
GATAACACCG TTACAGAATG TTGGATCTTC GAAGGCGGCG GTAAAATTGG TCGTTATGTC
GGCGGTTATC ATGATGCCCG TGGTCAGCAA GAGCAGTATG TGGCGCTCAA ACAGCCTGCG
GTGAAAAAAA CCGAAGAAGC CGCCGCGGCA AAAGCAGAAA CTGTAAAACG CAGCAGTAGC
AAACTAAGCT ATAAATTGCA GCGCGAACTG GAGCAGCTAC CGCAATTGCT CGAAGATCTG
GAGGCGAAGC TGGAAGCCCT ACAGACGCAG GTGGCGGATG CTTCCTTCTT CAGTCAGCCA
CATGAGCAGA CACAAAAAGT GCTCGCCGAT ATGGCTGCTG CAGAGCAGGA GCTGGAGCAA
GCCTTTGAAC GCTGGGAGTA TCTTGAAGCG TTAAAAAATG GTGGCTGA
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| Protein sequence | MSLISMHGAW LSFSDAPLLD NAELHIEDNE RVCLVGRNGA GKSTLMKILN REQGLDDGRI
IYEQDLIVAR LQQDPPRNVE GSVYDFVAEG IEEQAEYLKR YHDISRLVMN DPSEKNLNEL
AKVQEQLDHH NLWQLENRIN EVLAQLGLDP NVALSSLSGG WLRKAALGRA LVSNPRVLLL
DEPTNHLDIE TIDWLEGFLK TFNGTIIFIS HDRSFIRNMA TRIVDLDRGK LVTYPGNYDQ
YLLEKEEALR VEELQNAEFD RKLAQEEVWI RQGIKARRTR NEGRVRALKA MRRERGERRE
VMGTAKMQVE EASRSGKIVF EMEDVCYQVD GKQLVKDFSA QVLRGDKIVL IGPNGCGKTT
LLKLMLGQLQ ADSGRIHVGT KLEVAYFDQH RAELDPDKTV MDNIAEGKQE VMVNGKPRHV
LGYLQDFLFH PKRAMTPVRA LSGGERNRLL LARLFLKPSN LLILDEPTND LDVETLELLE
ELIDSYQGTV LLVSHDRQFV DNTVTECWIF EGGGKIGRYV GGYHDARGQQ EQYVALKQPA
VKKTEEAAAA KAETVKRSSS KLSYKLQREL EQLPQLLEDL EAKLEALQTQ VADASFFSQP
HEQTQKVLAD MAAAEQELEQ AFERWEYLEA LKNGG
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