| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2342 |
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| Symbol | hyaB |
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| ID | 6271841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2131283 |
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| End bp | 2133076 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641726346 |
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| Product | hydrogenase 1 large subunit |
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| Protein accession | YP_001880829 |
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| Protein GI | 187731287 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.514327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTC AGTACGAAAC TCAGGGATAC ACCATCAATA ATGCCGGACG CCGCCTGGTG
GTCGACCCGA TTACGCGCAT CGAAGGCCAC ATGCGCTGCG AAGTGAATAT TAACGATCAG
AATGTGATCA CCAATGCCGT CTCCTGCGGC ACCATGTTTC GCGGGCTGGA GATCATCCTA
CAAGGGCGCG ACCCGCGCGA TGCGTGGGCG TTCGTTGAAC GTATCTGCGG CGTCTGTACT
GGCGTACACG CCCTGGCTTC GGTTTACGCC ATCGAAGATG CTATCGGTAT TAAAGTGCCG
GACAACGCCA ATATCATCCG CAACATTATG CTGGCAACGC TCTGGTGCCA CGATCATCTG
GTGCACTTCT ATCAGCTTGC CGGGATGGAC TGGATCGATG TGTTAGATGC GCTGAAAGCC
GACCCGCGGA AAACCTCCGA ACTGGCGCAA AGTCTCTCCT CTTGGCCGAA ATCATCCCCT
GGCTATTTCT TCGACGTACA AAACCGCCTG AAAAAATTTG TTGAAGGCGG GCAGTTGGGG
ATCTTCCGCA ATGGCTACTG GGGGCACCCG CAGTACAAAC TGCCGCCAGA AGCTAACCTG
ATGGGCTTTG CCCACTATCT CGAAGCTCTC GATTTCCAGC GTGAAATTGT CAAAATCCAC
GCGGTCTTTG GCGGTAAAAA CCCGCATCCA AACTGGATTG TCGGCGGGAT GCCTTGCGCC
ATCAACATTG ACGAAAGCGG CGCGGTCGGG GCAGTCAATA TGGAACGCCT GAACCTGGTG
CAGTCAATTA TCACCCGCAC GGCGGACTTC ATTAACAACG TGATGATCCC CGACGCCTTA
GCCATCGGTC AGTTCAACAA ACCGTGGAGC GAAATCGGCA CTGGTCTTTC TGATAAATGC
GTTCTCAGCT ACGGCGCATT CCCGGATATT GCCAACGACT TTGGCGAGAA AAGTCTGCTG
ATGCTTGGCG GCGCGGTGAT TAACGGCGAC TTCAACAATG TGCTGCCAGT GGATTTGGTT
GATCCGCAGC AGGTGCAGGA GTTTGTCGAC CACGCCTGGT ATCGATATCC CAACGATCAG
GTCGGGCGTC ATCCGTTCGA TGGCATCACC GACCCGTGGT ACAACCCCGG CGATGTCAAA
GGCAGCGATA CCAACATTCA GCAGCTGAAT GAACAGGAAC GCTACTCGTG GATCAAAGCG
CCACGCTGGC GCGGTAACGC GATGGAAGTG GGGCCGCTGG CGCGCACGTT AATCGCTTAT
CACAAAGGCG ATGCTGCGAC CGTTGAGTCG GTCGATCGCA TGATGTCGGC GTTGAACCTG
CCGCTTTCCG GTATCCAGTC AACGTTAGGC CGCATTTTGT GCCGCGCGCA CGAAGCGCAG
TGGGCCGCAG GTAAGTTGCA GTATTTCTTC GACAAGCTGA TGACCAACCT GAAAAACGGC
AATCTCGCCA CTGCTTCCAC GGAAAAATGG GAACCTGCAA CCTGGCCGAC AGAGTGCCGT
GGTGTCGGTT TTACCGAAGC GCCGCGCGGG GCGTTAGGCC ACTGGGCCGC CATTCGCGAT
GGCAAGATTG ATCTCTACCA GTGCGTGGTG CCGACCACCT GGAACGCCAG CCCGCGCGAT
CCCAAAGGGC AGATTGGCGC TTATGAAGCG GCGCTGATGA ACACCAAAAT GGCGATCCCC
GAGCAACCGC TGGAGATCCT GCGTACTCTG CACAGCTTTG ACCCGTGCCT CGCCTGTTCA
ACACACGTGC TGGGCGACGA CGGTAGCGAG CTGATCTCCG TGCAGGTGCG TTAA
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| Protein sequence | MSTQYETQGY TINNAGRRLV VDPITRIEGH MRCEVNINDQ NVITNAVSCG TMFRGLEIIL
QGRDPRDAWA FVERICGVCT GVHALASVYA IEDAIGIKVP DNANIIRNIM LATLWCHDHL
VHFYQLAGMD WIDVLDALKA DPRKTSELAQ SLSSWPKSSP GYFFDVQNRL KKFVEGGQLG
IFRNGYWGHP QYKLPPEANL MGFAHYLEAL DFQREIVKIH AVFGGKNPHP NWIVGGMPCA
INIDESGAVG AVNMERLNLV QSIITRTADF INNVMIPDAL AIGQFNKPWS EIGTGLSDKC
VLSYGAFPDI ANDFGEKSLL MLGGAVINGD FNNVLPVDLV DPQQVQEFVD HAWYRYPNDQ
VGRHPFDGIT DPWYNPGDVK GSDTNIQQLN EQERYSWIKA PRWRGNAMEV GPLARTLIAY
HKGDAATVES VDRMMSALNL PLSGIQSTLG RILCRAHEAQ WAAGKLQYFF DKLMTNLKNG
NLATASTEKW EPATWPTECR GVGFTEAPRG ALGHWAAIRD GKIDLYQCVV PTTWNASPRD
PKGQIGAYEA ALMNTKMAIP EQPLEILRTL HSFDPCLACS THVLGDDGSE LISVQVR
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