| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2334 |
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| Symbol | etk1 |
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| ID | 6269486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2122120 |
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| End bp | 2124300 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641726338 |
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| Product | cryptic autophosphorylating protein tyrosine kinase Etk |
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| Protein accession | YP_001880821 |
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| Protein GI | 187730183 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTA AAAATATGAA TACGCCACCA GGCAGTACTC AGGAAAATGA GATCGATCTG
CTTCGTCTGG TCGGCGAGTT ATGGGATCAC CGTAAGTTTA TTATCAGCGT GACCGCGTTA
TTCACGCTGA TCGCTGTCGC TTACTCGCTG TTAAGCACAC CAATTTATCA GGCAGATACT
CTGGTCCAGG TTGAGCAAAA ACAGGGCAAC GCCATTCTCA GCGGCCTGAG CGATATGATC
CCTAACTCAT CGCCCGAGTC TGCACCGGAG ATTCAACTGC TGCAATCGCG CATGATTCTC
GGTAAAACCA TTGCTGAACT GAATCTGCGC GACATAGTTG AGCAGAAGTA TTTTCCGATT
GTGGGTCGCG GCTGGGCGAG ATTAACCAAA GAAAAACCAG GTGAGCTGGC GATCAGCTGG
ATGCATATTC CACAACTGAA TGGTCAGGAT CAGCAACTGA CACTCACGGT TGGGGAAAAC
GGCCACTATA CACTGGAAGG TGAAGAGTTC ACCGTCAATG GTATGGTCGG CCAGCGTCTG
GAAAAAGATG GCGTTGCGCT GACTATCGCG GACATTAAGG CCAAACCAGG AACACAGTTT
GTCCTGAGCC AGCCTACCGA ACTGGAAGCG ATTAACGCAT TGCAGGAAAC CTTTACCGTT
AGCGAACGCA GTAAAGAAAG CGGGATGCTG GAACTTACCA TGACTGGTGA TGATCCCCAG
TTGATTACTC GTATTCTGAA CAGCATCGCT AACAACTATT TGCAACAGAA TATCGCTCGC
CAGGCGGCGC AGGATTCACA AAGCCTTGAA TTCTTACAGC GCCAGTTGCC TGAAGTGCGC
AGCGAGCTGG ACCAGGCGGA AGAAAAACTC AACGTTTATC GCCAGCAGCG CGATTCGGTT
GACCTTAACC TAGAAGCCAA AGCCGTTCTT GAGCAGATTG TGAACGTTGA TAATCAACTC
AATGAGCTGA CTTTCCGCGA GGCAGAGATC TCCCAGCTGT ATAAGAAAGA TCACCCAACT
TATCGTGCGC TGCTGGAAAA ACGCCAGACG CTGGAGCAAG AACGCAAACG CCTGAATAAG
CGGGTATCGG CAATGCCTTC CACTCAACAG GAAGTGTTAC GTTTAAGCCG TGACGTAGAA
GCGGGCCGTG CGGTATATCT GCAATTACTT AACCGCCAGC AGGAGTTGAG TATTTCGAAA
TCCAGTGCCA TTGGTAACGT GCGGATTATC GACCCGGCAG TCACTCAGCC GCAGCCAGTG
AAACCGAAAA AAGCGTTGAA CGTGGTGCTT GGTTTTATTC TTGGCCTGTT TATTTCGGTG
GGTGCCGTGC TGGCGCGTGC GATGTTGCGT CGTGGTGTAG AAGCCCCGGA ACAACTGGAA
GAGCACGGCA TCAGCGTTTA TGCCACTATC CCAATGTCCG AGTGGCTGGA TAAACGTACC
CGTCTGCGTA AGAAAAATTT ATTTTCTAAT CAGCAGCGCC ATCGTACTAA AAATATCCCC
TTCCTGGCGG TGGATAACCC GGCGGATTCT GCTGTGGAAG CCGTACGTGC GCTACGAACC
AGTCTGCACT TCGCTATGAT GGAGACGGAG AATAACATTC TGATGATCAC CGGTGCGACG
CCAGACAGTG GTAAAACGTT TGTCAGTTCA ACTCTGGCAG CGGTGATCGC CCAGTCCGAT
CAAAAAGTGT TATTTATTGA TGCCGACTTA CGCCGTGGTT ATTCGCATAA CCTGTTTACC
GTGAGTAATG AACATGGCTT GTCGGAATAT CTGGCAGGTA AAGATGAGCT CAACAAAGTG
ATCCAGCATT TTGGCAAAGG AGGCTTTGAT GTGATTACTC GCGGTCAGGT GCCACCTAAC
CCGTCTGAAC TGCTGATGCG CGATCGGATG CGTCAATTAC TGGAATGGGC GAACGACCAT
TACGATCTGG TGATTGTCGA TACGCCGCCG ATGCTGGCGG TGAGTGATGC CGCGGTCGTG
GGGCGTTCTG TTGGCACCAG CCTGCTGGTT GCGCGTTTTG GCTTGAACAC CGCCAAAGAG
GTGAGTTTGT CAATGCAGCG TCTGGAACAG GCAGGCGTCA ATATTAAAGG CGCTATCCTC
AATGGTGTGA TTAAACGCGC CAGCACCGCT TACAGTTACG GCTATAACTA TTACGGTTAT
AGTTACTCCG AGAAAGAGTA A
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| Protein sequence | MTTKNMNTPP GSTQENEIDL LRLVGELWDH RKFIISVTAL FTLIAVAYSL LSTPIYQADT
LVQVEQKQGN AILSGLSDMI PNSSPESAPE IQLLQSRMIL GKTIAELNLR DIVEQKYFPI
VGRGWARLTK EKPGELAISW MHIPQLNGQD QQLTLTVGEN GHYTLEGEEF TVNGMVGQRL
EKDGVALTIA DIKAKPGTQF VLSQPTELEA INALQETFTV SERSKESGML ELTMTGDDPQ
LITRILNSIA NNYLQQNIAR QAAQDSQSLE FLQRQLPEVR SELDQAEEKL NVYRQQRDSV
DLNLEAKAVL EQIVNVDNQL NELTFREAEI SQLYKKDHPT YRALLEKRQT LEQERKRLNK
RVSAMPSTQQ EVLRLSRDVE AGRAVYLQLL NRQQELSISK SSAIGNVRII DPAVTQPQPV
KPKKALNVVL GFILGLFISV GAVLARAMLR RGVEAPEQLE EHGISVYATI PMSEWLDKRT
RLRKKNLFSN QQRHRTKNIP FLAVDNPADS AVEAVRALRT SLHFAMMETE NNILMITGAT
PDSGKTFVSS TLAAVIAQSD QKVLFIDADL RRGYSHNLFT VSNEHGLSEY LAGKDELNKV
IQHFGKGGFD VITRGQVPPN PSELLMRDRM RQLLEWANDH YDLVIVDTPP MLAVSDAAVV
GRSVGTSLLV ARFGLNTAKE VSLSMQRLEQ AGVNIKGAIL NGVIKRASTA YSYGYNYYGY
SYSEKE
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