| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2296 |
|---|
| Symbol | |
|---|
| ID | 6273227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2085412 |
|---|
| End bp | 2086350 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641726309 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
|---|
| Protein accession | YP_001880793 |
|---|
| Protein GI | 187733474 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.544337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCA TCTTTTATCA CCCAACGTTC GATACCCAAT GGTGGATTGA GGCACTGCGC
AAAGCTATTC CTCAGGCAAG AGTCAGAGCA TGGAAAAGCG GAGATAATGA CTCTGCTGAT
TATGCTTTAG TCTGGCATCC TCCTGTTGAA ATGCTGGCAG GGCGCGATCT TAAAGCGGTG
TTCGCACTCG GGGCCGGTGT TGATTCTATT TTGAGCAAGC TACAGGCACA CCCTGAAATG
CTGAACCCTT CTGTTCCACT TTTTCGCCTG GAAGATACTG GTATGGGCGA GCAAATGCAG
GAATATGCTG TCAGTCAGGT GCTGCATTGG TTTCGACGTT TTGACGATTA TCGCATCCAG
CAAAATAGTT CGCATTGGCA ACCGCTGCCT GAATATCATT GGGAAGATTT TACCATCGGC
ATTTTGGGCG CAGGCGTACT GGGCAGTAAA GTTGCTCAGA GTCTGCAAAC CTGGCGCTTT
CCGCTGCGTT GCTGGAGTCG AACCCGTAAA TCGTGGCCTG GCGTGCAAAG CTTTGCCGGA
CGGGAAGAAC TGTCTGCATT TCTGAGCCAA TGTCGGGTAT TGATTAATTT GTTACCGAAT
ACCCCTGAAA CCGTCGGCAT TATTAATCAA CAATTACTCG AAAAATTACC GGATGGCGCG
TATCTCCTCA ACCTGGCGCG TGGTGTTCAT GTTGTGGAAG ATGACCTGCT CGCGGCGCTG
GATAGCGGCA AAGTTAAAGG CGCAATGTTG GATGTTTTTA ATCGTGAACC CTTACCGCCT
GAAAGTCCGC TCTGGCAACA TCCACGCGTG ACGATAACAC CACATGTCGC CGCGATTACC
CGTCCCGCTG AAGCTGTGGA GTACATTTCT CGCACCATTG CCCAGCTCGA AAAAGGGGAG
AGGGTCTGCG GGCAAGTCGA CCGCGCACGC GGCTACTAA
|
|---|
| Protein sequence | MDIIFYHPTF DTQWWIEALR KAIPQARVRA WKSGDNDSAD YALVWHPPVE MLAGRDLKAV
FALGAGVDSI LSKLQAHPEM LNPSVPLFRL EDTGMGEQMQ EYAVSQVLHW FRRFDDYRIQ
QNSSHWQPLP EYHWEDFTIG ILGAGVLGSK VAQSLQTWRF PLRCWSRTRK SWPGVQSFAG
REELSAFLSQ CRVLINLLPN TPETVGIINQ QLLEKLPDGA YLLNLARGVH VVEDDLLAAL
DSGKVKGAML DVFNREPLPP ESPLWQHPRV TITPHVAAIT RPAEAVEYIS RTIAQLEKGE
RVCGQVDRAR GY
|
|---|
| |