Gene SbBS512_E2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2226 
Symboltmk 
ID6269197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp2025950 
End bp2026591 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content54% 
IMG OID641726247 
Productthymidylate kinase 
Protein accessionYP_001880732 
Protein GI187732338 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000221684 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGTA AGTATATCGT CATTGAGGGG CTGGAAGGCG CAGGCAAAAC TACCGCGCGT 
AATGTGGTGG TTGAGACGCT TGAGCAACTG GGTATCCGCG ACATGGTTTT CACTCGGGAA 
CCTGGCGGTA CGCAACTTGC CGAAAAGTTA AGAAGCCTGG TGCTGGATAT CAAATCGGTA 
GGCGATGAAG TCATTACCGA TAAAGCCGAA GTTCTGATGT TTTATGCCGC GCGCGTTCAA 
CTGGTAGAAA CGGTCATCAA ACCAGCTCTG GCTAACGGCA CCTGGGTGAT TGGCGATCGC 
CACGATCTCT CCACTCAGGC GTATCAGGGC GGAGGACGTG GTATTGACCA ACATATGCTG 
GCAACACTGC GTGATGCTGT TCTCGGGGAT TTTCGCCCCG ACTTAACGCT CTATCTCGAT 
GTTACCCCGG AAGTTGGCTT AAAACGCGCG CGTGCGCGCG GCGAGCTGGA TCGTATTGAG 
CAAGAGTCTT TCGATTTCTT TAATCGCACC CGCGCCCGCT ATCTGGAACT GGCTGCACAA 
GATAAAAGTA TTCATACCAT TGATGCCACC CAGCCGCTGG AGGCCGTGAT GGATGCAATC 
CGCACTACCG TGACCCACTG GGTGAAGGAG TTGGACGCAT GA
 
Protein sequence
MRSKYIVIEG LEGAGKTTAR NVVVETLEQL GIRDMVFTRE PGGTQLAEKL RSLVLDIKSV 
GDEVITDKAE VLMFYAARVQ LVETVIKPAL ANGTWVIGDR HDLSTQAYQG GGRGIDQHML 
ATLRDAVLGD FRPDLTLYLD VTPEVGLKRA RARGELDRIE QESFDFFNRT RARYLELAAQ 
DKSIHTIDAT QPLEAVMDAI RTTVTHWVKE LDA