Gene SbBS512_E2068 details

Gene Information

• Locus tag: SbBS512_E2068
• ID: 6272397
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 1880418
• End bp: 1882328
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641726106
• Product: hypothetical protein
• Protein accession: YP_001880600
• Protein GI: 187732646
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases
• TIGRFAM ID: [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGACG ATTTTGCACC AGACGGTCAG CTGGCGAAAG CGATACCAGG CTTTAAGCCG 
CGAGAACCAC AGCGACAGAT GGCGGTAGCC GTCACCCAGG CGATAGAAAA AGGCCAGCCG 
CTGGTGGTGG AAGCAGGAAC CGGTACGGGC AAAACCTACG CTTACCTGGC TCCTGCGCTG 
CGGGCGAAAA AGAAAGTCAT TATCTCGACC GGCTCAAAAG CGTTGCAGGA TCAGCTCTAC 
AGCCGCGATT TGCCAACAGT CTCAAAGGCA TTGAAATATA CGGGCAACGT GGCGCTGCTG 
AAAGGGCGCT CAAACTACCT CTGCCTCGAA CGTCTCGAAC AGCAGGCGCT GGCGGGGGGC 
GATCTGCCGG TACAAATCTT AAGCGATGTG ATCCTGCTGC GCTCCTGGTC TAATCAAACA 
GTCGATGGTG ATATCAGCAC CTGCGTCAGC GTGGCGGAAG ATTCACAGGC GTGGCCGCTG 
GTTACCAGCA CCAACGACAA CTGTCTTGGC AGCGACTGCC CGATGTATAA AGATTGCTTT 
GTGGTCAAAG CACGTAAAAA AGCGATGGAC GCCGATGTGG TGGTGGTAAA CCATCATCTC 
TTTCTGGCGG ATATGGTGGT TAAAGAGAGT GGATTTGGCG AACTGATCCC GGAAGCGGAC 
GTCATGATCT TCGACGAAGC CCACCAGCTA CCGGACATTG CCAGCCAGTA TTTTGGTCAG 
TCACTCTCCA GTCGACAACT GCTCGACCTG GCAAAAGACA TCACCATCGC CTACCGCACC 
GAATTAAAAG ACACCCAGCA GTTACAAAAG TGCGCTGATC GTCTTGCCCA GAGTGCGCAG 
GATTTTCGTC TGCAACTCGG TGAGCCAGGT TATCGAGGTA ACCTGCGTGA GCTGTTAGCT 
AATCCGCAAA TTCAGCGGGC ATTTTTACTG CTCGATGACA CCCTGGAACT TTGTTATGAC 
GTGGCGAAAC TGTCACTGGG GCGTTCCGCC TTGCTGGATG CGGCATTTGA GCGCGCTACG 
TTGTATCGCA CACGGCTGAA GCGGCTAAAA GAGATCAATC AGCCGGGCTA CAGCTACTGG 
TACGAATGCA CTTCGCGCCA TTTTACTCTG GCTCTCACGC CGCTCAGCGT GGCGGATAAA 
TTCAAAGAGT TAATGGCGCA AAAGCCTGGT AGCTGGATCT TCACCTCAGC AACGCTGTCG 
GTGAACGACG ATCTGCATCA TTTCACCTCG CGGCTTGGGA TAGAACAGGC GGAGTCGTTG 
CTATTGCCAA GCTCGTTTGA TTACAGCCGC CAGGCGTTAC TCTGTGTGCC GCGCAATCTG 
CCGCAAACCA ACCAGCCAGG TTCTGCTCGC CAGTTAGCGG CAATGCTGCG ACCGATCATC 
GAAGCTAACA ACGGTCGTTG TTTTATGCTT TGTACCTCGC ACGCCATGAT GCGTGATCTG 
GCCGAGCAGT TCCGCGCTAC CATGACGCTT CCCGTTTTGT TGCAGGGGGA AACCAGCAAA 
GGGCAACTGT TGCAGCAATT TGTCAGCGCC GGTAACGCGC TTCTTGTGGC AACCAGTAGT 
TTCTGGGAAG GGGTGGACGT GCGTGGCGAT ACATTGTCAT TGGTGATTAT CGACAAGTTG 
CCGTTTACCT CACCGGATGA CCCGCTGTTA AAAGCGCGCA TGGAAGATTG CCGTTTGCGC 
GGTGGCGACC CGTTCGATGA AGTACAACTG CCGGATGCGG TGATTACTCT CAAGCAGGGG 
GTAGGGCGAC TGATTCGCGA CGCCGACGAT CGCGGGGTTT TGGTGATTTG TGACAATCGG 
CTGGTGATGC GCCCTTACGG CGCGACGTTT CTCGCCAGTC TGCCGCCCGC GCCGCGCACC 
CGTGACATTG CCCGTGCGGT TCGTTTCCTT GCGATACCAT CCTCCAGGTA A 

 

Protein sequence

MTDDFAPDGQ LAKAIPGFKP REPQRQMAVA VTQAIEKGQP LVVEAGTGTG KTYAYLAPAL 
RAKKKVIIST GSKALQDQLY SRDLPTVSKA LKYTGNVALL KGRSNYLCLE RLEQQALAGG 
DLPVQILSDV ILLRSWSNQT VDGDISTCVS VAEDSQAWPL VTSTNDNCLG SDCPMYKDCF 
VVKARKKAMD ADVVVVNHHL FLADMVVKES GFGELIPEAD VMIFDEAHQL PDIASQYFGQ 
SLSSRQLLDL AKDITIAYRT ELKDTQQLQK CADRLAQSAQ DFRLQLGEPG YRGNLRELLA 
NPQIQRAFLL LDDTLELCYD VAKLSLGRSA LLDAAFERAT LYRTRLKRLK EINQPGYSYW 
YECTSRHFTL ALTPLSVADK FKELMAQKPG SWIFTSATLS VNDDLHHFTS RLGIEQAESL 
LLPSSFDYSR QALLCVPRNL PQTNQPGSAR QLAAMLRPII EANNGRCFML CTSHAMMRDL 
AEQFRATMTL PVLLQGETSK GQLLQQFVSA GNALLVATSS FWEGVDVRGD TLSLVIIDKL 
PFTSPDDPLL KARMEDCRLR GGDPFDEVQL PDAVITLKQG VGRLIRDADD RGVLVICDNR 
LVMRPYGATF LASLPPAPRT RDIARAVRFL AIPSSR