Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1954 |
Symbol | ihfA |
ID | 6273205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1786986 |
End bp | 1787285 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641726008 |
Product | integration host factor subunit alpha |
Protein accession | YP_001880502 |
Protein GI | 187732420 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.57207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTTA CAAAAGCTGA AATGTCAGAA TATCTGTTTG ATAAGCTTGG GCTTAGCAAG CGGGATGCCA AAGAACTGGT TGAACTGTTT TTCGAAGAGA TCCGTCGCGC TCTGGAAAAC GGCGAACAGG TGAAACTCTC TGGTTTTGGT AACTTCGATC TGCGTGATAA GAATCAACGC CCGGGACGTA ACCCGAAAAC GGGCGAGGAT ATTCCCATTA CAGCACGGCG CGTGGTGACC TTCAGACCCG GGCAGAAGTT AAAAAGCCGG GTCGAAAACG CTTCGCCCAA AGACGAGTAA
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Protein sequence | MALTKAEMSE YLFDKLGLSK RDAKELVELF FEEIRRALEN GEQVKLSGFG NFDLRDKNQR PGRNPKTGED IPITARRVVT FRPGQKLKSR VENASPKDE
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