| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1905 |
|---|
| Symbol | ppsA |
|---|
| ID | 6272037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 1746370 |
|---|
| End bp | 1748748 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641725968 |
|---|
| Product | phosphoenolpyruvate synthase |
|---|
| Protein accession | YP_001880462 |
|---|
| Protein GI | 187733162 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACA ATGGCTCGTC ACCGCTGGTG CTTTGGTACA ACCAACTCGG CATGAATGAT
GTAGACAGGG TTGGGGGCAA AAATGCCTCC CTGGGTGAAA TGATTACTAA CCTTTCCGGA
ATGGGCGTTT CCGTTCCGAA TGGTTTCGCC ACAACCGCCG ACGCGTTTAA CCAGTTTCTG
GACCAAAGCG GCGTAAACCA GCGCATTTAT GAACTGCTGG ATAAAACGGA TATTGACGAT
GTTACTCAGC TTGCGAAAGC GGGCGCGCAA ATCCGCCAGT GGATTATCGA CACTCCCTTC
CAGGCTGAGC TGGAAAACGC CATCCGCGAA GCCTATGCTC AGCTTTCCGC CGATGACGAA
AACGCCTCTT TTGCGGTGCG CTCCTCCGCC ACCGCAGAAG ATATGCCGGA CGCTTCCTTT
GCCGGTCAGC AGGAAACCTT CCTCAACGTT CAGGGGTTTG ACGCCGTTCT CGTGGCAGTG
AAACATGTAT TTGCTTCTCT GTTTAACGAT CGCGCCATCT CTTATCGTGT GCACCAGGGT
TACGATCACC GTGGCGTGGC GCTCTCCGCC GGTGTTCAGC GGATGGTGCG CTCCGACCTC
GCATCTTCTG GCGTGATGTT CTCCATTGAT ACCGAATCCG GCTTTGACCA GGTGGTGTTT
ATCACTTCCG CATGGGGCCT TGGTGAGATG GTCGTGCAGG GGGCGGTTAA CCCGGATGAG
TTTTACGTGC ATAAACCGAC ACTGGCGGCG AATCGCCCGG CTATCGTGCG CCGCACCATG
GGGTCGAAAA AAATCCGCAT GGTTTACGCG CCGACCCAGG AGCACGGCAA GCAGGTTAAA
ATCGAAGACG TACCGCAGGA ACAGCGTGAC ATCTTCTCGC TGACCAACGA AGAAGTGCAG
GAACTGGCAA AACAGGCCGT ACAAATTGAG AAACACTACG GTCGCCCGAT GGATATTGAG
TGGGCGAAAG ATGGCCACAC CGGCAAACTG TTCATTGTGC AGGCGCGTCC GGAAACCGTG
CGCTCACGCG GTCAGGTCAT GGAGCGTTAT ACGCTGCATT CACAGGGTAA GATTATCGCC
GAAGGCCGTG CTATCGGTCA TCGCATCGGT GCGGGTCCGG TGAAAGTCAT CCATGACATC
AGCGAAATGA ACCGCATCGA ACCTGGTGAC GTGCTGGTCA CTGACATGAC CGACCCGGAC
TGGGAACCGA TCATGAAGAA AGCATCTGCC ATCGTCACCA ACCGTGGCGG TCGTACCTGT
CACGCGGCGA TCATCGCTCG TGAACTGGGT ATTCCGGCGG TAGTGGGCTG TGGTGATGCA
ACAGAACGGA TGAAAGACGG TGAGAACGTC ACTGTTTCTT GTGCCGAAGG TGATACCGGT
TACGTCTATG CGGAGTTGCT GGAATTTAGC GTGAAAAGCT CCAGCGTAGA AACCATGCCG
GATCTGCCGT TGAAAGTGAT GATGAACGTC GGTAACCCGG ATCGAGCTTT CGACTTCGCC
TGTCTGCCGA ACAAAGGCGT GGGACTTGCG CGTCTGGAAT TTATCATCAA CCGTATGATT
GGCGTCCACC CACGCGCACT GCTTGAGTTT GACGATCAGG AACCGCAGTT GCAAAACGAA
ATCCGCGAGA TGATGAAAGG TTTTGATTCT CCGCGTGAAT TTTACGTTGG TCGTCTGACT
GAAGGGATCG CGACGCTGGG TGCCGCGTTT TATCCGAAGC GCGTCATTGT CCGTCTCTCT
GATTTTAAAT CGAACGAATA TGCCAACCTG GTCGGTGGTG AGCGTTACGA GCCAGATGAA
GAGAACCCGA TGCTCGGCTT CCGTGGCGCG GGCCGCTATG TTTCCGACAG CTTCCGCGAC
TGCTTCGCGC TGGAGTGTGA AGCAGTGAAA CGTGTGCGCA ACGACATGGG GCTGACCAAC
GTTGAGATCA TGATCCCGTT CGTGCGTACC GTAGACCAGG CGAAAGCGGT GGTTGAAGAA
CTGGCGCGTC AGGGGCTGAA GCGTGGTGAG AACGGGCTGA AAATCATCAT GATGTGTGAA
ATCCCGTCCA ACGCCTTGCT GGCCGAGCAG TTCCTCGAAT ATTTCGACGG CTTCTCAATT
GGCTCAAACG ACATGACGCA GTTGGCGCTC GGTCTGGATC GTGACTCCGG CGTGGTGTCT
GAACTGTTCG ATGAGCGCAA CGATGCGGTG AAAGCATTGC TGTCGATGGC TATCCGTGCC
GCGAAGAAAC AGGGCAAATA TGTCGGGATT TGCGGTCAGG GTCCGTCCGA CCACGAAGAT
TTTGCCGCAT GGTTGATGGA AGAGGGGATC GATAGCCTGT CTCTGAATCC GGACACCGTG
GTGCAAACCT GGTTAAGCCT GGCTGAACTG AAGAAATAA
|
|---|
| Protein sequence | MSNNGSSPLV LWYNQLGMND VDRVGGKNAS LGEMITNLSG MGVSVPNGFA TTADAFNQFL
DQSGVNQRIY ELLDKTDIDD VTQLAKAGAQ IRQWIIDTPF QAELENAIRE AYAQLSADDE
NASFAVRSSA TAEDMPDASF AGQQETFLNV QGFDAVLVAV KHVFASLFND RAISYRVHQG
YDHRGVALSA GVQRMVRSDL ASSGVMFSID TESGFDQVVF ITSAWGLGEM VVQGAVNPDE
FYVHKPTLAA NRPAIVRRTM GSKKIRMVYA PTQEHGKQVK IEDVPQEQRD IFSLTNEEVQ
ELAKQAVQIE KHYGRPMDIE WAKDGHTGKL FIVQARPETV RSRGQVMERY TLHSQGKIIA
EGRAIGHRIG AGPVKVIHDI SEMNRIEPGD VLVTDMTDPD WEPIMKKASA IVTNRGGRTC
HAAIIARELG IPAVVGCGDA TERMKDGENV TVSCAEGDTG YVYAELLEFS VKSSSVETMP
DLPLKVMMNV GNPDRAFDFA CLPNKGVGLA RLEFIINRMI GVHPRALLEF DDQEPQLQNE
IREMMKGFDS PREFYVGRLT EGIATLGAAF YPKRVIVRLS DFKSNEYANL VGGERYEPDE
ENPMLGFRGA GRYVSDSFRD CFALECEAVK RVRNDMGLTN VEIMIPFVRT VDQAKAVVEE
LARQGLKRGE NGLKIIMMCE IPSNALLAEQ FLEYFDGFSI GSNDMTQLAL GLDRDSGVVS
ELFDERNDAV KALLSMAIRA AKKQGKYVGI CGQGPSDHED FAAWLMEEGI DSLSLNPDTV
VQTWLSLAEL KK
|
|---|
| |