Gene SbBS512_E1887 details

Gene Information

• Locus tag: SbBS512_E1887
• Symbol: ydiL
• ID: 6268515
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 1728193
• End bp: 1728603
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641725950
• Product: hypothetical protein
• Protein accession: YP_001880445
• Protein GI: 187731682
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATGGA AACGGAAAAT CACCCTGGAA GCACTGAATG CTATGGGTGA AGGAAACATG 
GTGGGGTTCC TGGATATTCG CTTTGAACAT ATTGGTGATG ACACCCTTGA AGCGACAATG 
CCAGTAGACT CGCGGACAAA GCAGCCTTTC GGGTTGCTGC ATGGAGGAGC ATCCGTGGTA 
CTGGCCGAAA GTATCGGTTC CGTTGCCGGT TATTTATGTA CCGAAGGTGA GCAAAAAGTG 
GTTGGTCTGG AAATCAATGC TAATCACGTC CGCTCGGCAC GAGAAGGGCG GGTGCGCGGC 
ATATGTAAAC CGTTGCATCT CGGTTCGCGT CACCAGGTCT GGCAGATTGA AATCTTCGAT 
GAGAAAGGGC GTTTGTGCTG TTCGTCACGA TTGACGACCG CCATTTTGTG A 

 

Protein sequence

MIWKRKITLE ALNAMGEGNM VGFLDIRFEH IGDDTLEATM PVDSRTKQPF GLLHGGASVV 
LAESIGSVAG YLCTEGEQKV VGLEINANHV RSAREGRVRG ICKPLHLGSR HQVWQIEIFD 
EKGRLCCSSR LTTAIL