Gene SbBS512_E1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1841 
Symbol 
ID6269899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1683334 
End bp1683933 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content52% 
IMG OID641725907 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001880405 
Protein GI187732442 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.170954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC ACACCGAACA TGATACTCGC GAACATCTCC TGGCGACGGG CGAGCAACTT 
TGCCTGCAAC GTGGATTCAC CGGGATGGGG CTAAGCGAAT TACTAAAAAC CGCTGAAGTG 
CCGAAAGGGT CCTTCTATCA CTACTTTCGC TCTAAAGAAG CGTTTGGCGT TGCCATGCTT 
GAGCGTCATT ACGCCGCATA TCACCAGCGA CTGACTGAGT TGCTGCAATC CGGCGAAGGT 
AACTACCGCG ACCGCATACT GGCTTATTAC CAGCAAACAC TGAACCAGTT TTGCCAACAT 
GGAACCATCA GTGGTTGCCT GACAGTAAAA CTCTCTGCCG AAGTGTGCGA TCTGTCAGAA 
GATATGCGCA GCGCGATGGA TAAAGGTGCT CGCGGCGTGA TCGCCCTGCT CTCTCAGGCG 
CTGGAAAATG GCCGTGAGAA CCATTGTTTA ACCTTTTGTG GCGAACCGCT ACAACAGGCA 
CAAGTGCTTT ACGCACTATG GCTGGGTGCG AATCTGCAGG CCAAAATTTC GCGCAGTTTC 
GAGCCACTGG AAAACGCGCT GGCCCATGTA AAAAACATTA TTGCGACGCC TGCCGTTTAG
 
Protein sequence
MNKHTEHDTR EHLLATGEQL CLQRGFTGMG LSELLKTAEV PKGSFYHYFR SKEAFGVAML 
ERHYAAYHQR LTELLQSGEG NYRDRILAYY QQTLNQFCQH GTISGCLTVK LSAEVCDLSE 
DMRSAMDKGA RGVIALLSQA LENGRENHCL TFCGEPLQQA QVLYALWLGA NLQAKISRSF 
EPLENALAHV KNIIATPAV